RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 WDR78Q5VTH9 848 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 TRIML1Q8N9V2 468 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 SMARCE1Q969G3 411 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 PNMA5Q96PV4 448 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 POLR3CQ9BUI4 534 aaPredicted RBP16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 LRRC27Q9C0I9 530 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 PORCNQ9H237 461 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 EFCC1Q9HA90 598 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 KBTBD4Q9NVX7 518 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 LRRC37A2A6NM11 1700 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 ZNF236Q9UL36 1845 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 FOXN1O15353 648 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 MAPK4P31152 587 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 ICAM3P32942 547 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 AFMP43652 599 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 TM4SF4P48230 202 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 SARSP49591 514 aaKnown RBP16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 MRE11P49959 708 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 NLRP12P59046 1061 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 B3GNT9Q6UX72 402 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 GSDMAQ96QA5 445 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 TUFT1Q9NNX1 390 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
SNRNP200-205ENST00000480835 DHX15O43143 795 aaKnown RBP16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 PRR29P0C7W0 189 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 PDE4DQ08499 809 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 DPYDQ12882 1025 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 EPHA7Q15375 998 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 SV2BQ7L1I2 683 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 UIMC1Q96RL1 719 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 GRPEL1Q9HAV7 217 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 ZFYVE28Q9HCC9 887 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 ASTN1O14525 1302 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 NFASCO94856 1347 aa16.59■□□□□ 0.25
SNRNP200-205ENST00000480835 ASB14A6NK59 587 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 SPATA31C2B4DYI2 1134 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 YY1P25490 414 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 KRT76Q01546 638 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 GRAMD1CQ8IYS0 662 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 MORC4Q8TE76 937 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 LARP4BQ92615 738 aaKnown RBP16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 RAD54LQ92698 747 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 PLIN2Q99541 437 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 EIF2AK1Q9BQI3 630 aaKnown RBP16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 GTPBP4Q9BZE4 634 aaKnown RBP16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 RBSNQ9H1K0 784 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 UNC45AQ9H3U1 944 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 CREBZFQ9NS37 354 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 BLOC1S4Q9NUP1 217 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 RMND1Q9NWS8 449 aa16.58■□□□□ 0.24
SNRNP200-205ENST00000480835 POTEB3A0JP26 581 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 SLC15A5A6NIM6 579 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 EML1O00423 815 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 TLR2O60603 784 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 MED24O75448 989 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 RGS20O76081 388 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 SFNP31947 248 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 JAK3P52333 1124 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 NOGQ13253 232 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 POTEBQ6S5H4 581 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 MIER3Q7Z3K6 550 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 CATSPER3Q86XQ3 398 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 ZNF784Q8NCA9 323 aaPredicted RBP16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 FAM200AQ8TCP9 573 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 CCDC47Q96A33 483 aaKnown RBP16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 FGD4Q96M96 766 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 MTRQ99707 1265 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 HSD17B14Q9BPX1 270 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 C7orf25Q9BPX7 421 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 SENP7Q9BQF6 1050 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 NAT10Q9H0A0 1025 aaKnown RBP16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 MAN1B1Q9UKM7 699 aa16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
SNRNP200-205ENST00000480835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 CHMP2AO43633 222 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 PGK2P07205 417 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 SPATA31C1P0DKV0 1188 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 TGFB3P10600 412 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 KCNA2P16389 499 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 ADORA2AP29274 412 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 GRB14Q14449 540 aa16.56■□□□□ 0.24
SNRNP200-205ENST00000480835 DEFB115Q30KQ5 88 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms