RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 GCOM1H8Y6P7 765 aaPredicted RBP10.38□□□□□ -0.75
VCP-206ENST00000480327 ADAMTS3O15072 1205 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 ZEB2O60315 1214 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 IGFBP4P22692 258 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 GPNMBQ14956 572 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 UBE2SQ16763 222 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 SMARCC2Q8TAQ2 1214 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 SYTL5Q8TDW5 730 aaPredicted RBP10.38□□□□□ -0.75
VCP-206ENST00000480327 ADAMTS19Q8TE59 1207 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 NECAB3Q96P71 396 aaPredicted RBP10.38□□□□□ -0.75
VCP-206ENST00000480327 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 ALG1Q9BT22 464 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 SEZ6LQ9BYH1 1024 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 PSTPIP2Q9H939 334 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 COL20A1Q9P218 1284 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 PCDHA11Q9Y5I1 949 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 SLC4A7Q9Y6M7 1214 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 MICAL3Q7RTP6 2002 aa10.38□□□□□ -0.75
VCP-206ENST00000480327 STK36Q9NRP7 1315 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 A6NJR5 290 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 hCG_1984214I3L0E3 225 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 MYL3P08590 195 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 COL9A1P20849 921 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 ADCY7P51828 1080 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 NLRP5P59047 1200 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 TFF2Q03403 129 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 TCTN1Q2MV58 587 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 KRT40Q6A162 431 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 DEFB128Q7Z7B8 93 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 HSCBQ8IWL3 235 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 RPUSD2Q8IZ73 545 aaKnown RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 ZNF713Q8N859 430 aaPredicted RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 RGS22Q8NE09 1264 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 OR6J1Q8NGC5 347 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 CUL5Q93034 780 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 PGBD1Q96JS3 809 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 POLR3EQ9NVU0 708 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 ADD3Q9UEY8 706 aaKnown RBP10.37□□□□□ -0.75
VCP-206ENST00000480327 KCNJ14Q9UNX9 436 aa10.37□□□□□ -0.75
VCP-206ENST00000480327 MEIS2O14770 477 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 CA3P07451 260 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 BMP1P13497 986 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 EIF2AK2P19525 551 aaKnown RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 CPT1AP50416 773 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 HSD17B4P51659 736 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 MRPL12P52815 198 aaKnown RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 GUCY1B3Q02153 619 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 ARHGEF16Q5VV41 709 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 PPP1R18Q6NYC8 613 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 CCDC62Q6P9F0 684 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 RASGRP4Q8TDF6 673 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 WASF1Q92558 559 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 SNX21Q969T3 373 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 RMDN3Q96TC7 470 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 MTG1Q9BT17 334 aaPredicted RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 MTIF3Q9H2K0 278 aaKnown RBP10.36□□□□□ -0.75
VCP-206ENST00000480327 CERS4Q9HA82 394 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 C6orf50Q9HD87 102 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 RIC8AQ9NPQ8 531 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 MTCH2Q9Y6C9 303 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 NLRC5Q86WI3 1866 aa10.36□□□□□ -0.75
VCP-206ENST00000480327 ZBBXA8MT70 800 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 IQCF3P0C7M6 154 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 MYCLP12524 364 aaPredicted RBP10.35□□□□□ -0.75
VCP-206ENST00000480327 POU3F3P20264 500 aaPredicted RBP10.35□□□□□ -0.75
VCP-206ENST00000480327 GJB2P29033 226 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 KCNQ1P51787 676 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 TAP1Q03518 808 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 DHX38Q92620 1227 aaKnown RBP10.35□□□□□ -0.75
VCP-206ENST00000480327 KAT2BQ92831 832 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 UHRF1Q96T88 793 aaPredicted RBP10.35□□□□□ -0.75
VCP-206ENST00000480327 ZMYND12Q9H0C1 365 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 SMC3Q9UQE7 1217 aa10.35□□□□□ -0.75
VCP-206ENST00000480327 SPDYE3A6NKU9 549 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 PIK3CDO00329 1044 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 LPXNO60711 386 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 PFKMP08237 780 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 SUPT20HL2P0C7V6 817 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 TXNP10599 105 aaKnown RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 XBP1P17861 261 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 GNA11P29992 359 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms