RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 LMNB2Q03252 620 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 PPM1JQ5JR12 505 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 CTR9Q6PD62 1173 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 CHURC1Q8WUH1 139 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 APBB2Q92870 758 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 POMKQ9H5K3 350 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 NCDNQ9UBB6 729 aa14.16□□□□□ -0.14
USP11-208ENST00000480104 HELZ2Q9BYK8 2649 aaKnown RBP14.15□□□□□ -0.14
USP11-208ENST00000480104 FSD2A1L4K1 749 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 SOBPA7XYQ1 873 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 PRR5-ARHGAP8B1AHC4 643 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 SRGAP2BP0DMP2 458 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 CALML3P27482 149 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 ARHGAP8P85298 464 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 LY6KQ17RY6 165 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 SLFNL1Q499Z3 407 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 SIX5Q8N196 739 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 MICAL1Q8TDZ2 1067 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 MKL1Q969V6 931 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
USP11-208ENST00000480104 CEP95Q96GE4 821 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 CDCA3Q99618 268 aaPredicted RBP14.15□□□□□ -0.14
USP11-208ENST00000480104 LIMD1Q9UGP4 676 aa14.15□□□□□ -0.14
USP11-208ENST00000480104 SP9P0CG40 484 aa14.14□□□□□ -0.15
USP11-208ENST00000480104 TDRD5Q8NAT2 981 aaKnown RBP14.14□□□□□ -0.15
USP11-208ENST00000480104 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
USP11-208ENST00000480104 SYNPO2Q9UMS6 1093 aa14.14□□□□□ -0.15
USP11-208ENST00000480104 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
USP11-208ENST00000480104 MYH4Q9Y623 1939 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 LOC400499M0QZD8 3231 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 DGKIO75912 1065 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 ICAM1P05362 532 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 KCNC3Q14003 757 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 TTF1Q15361 905 aaPredicted RBP14.13□□□□□ -0.15
USP11-208ENST00000480104 ALDH1L2Q3SY69 923 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 VARS2Q5ST30 1063 aaKnown RBP14.13□□□□□ -0.15
USP11-208ENST00000480104 LLGL2Q6P1M3 1020 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 TMEM184AQ6ZMB5 413 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 API5Q9BZZ5 524 aaKnown RBP14.13□□□□□ -0.15
USP11-208ENST00000480104 MKNK2Q9HBH9 465 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 FBXL21Q9UKT6 434 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 ANGPTL2Q9UKU9 493 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 PRR12Q9ULL5 1215 aa14.13□□□□□ -0.15
USP11-208ENST00000480104 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
USP11-208ENST00000480104 KINO60870 393 aaKnown RBP14.12□□□□□ -0.15
USP11-208ENST00000480104 TTLL1O95922 423 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 GNAI2P04899 355 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 SLC1A4P43007 532 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 PAN2Q504Q3 1202 aaKnown RBP14.12□□□□□ -0.15
USP11-208ENST00000480104 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 ZDHHC14Q8IZN3 488 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 GPR161Q8N6U8 529 aaKnown RBP14.12□□□□□ -0.15
USP11-208ENST00000480104 ATP6V0A1Q93050 837 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 GMCL1Q96IK5 515 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 NECTIN4Q96NY8 510 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 MPHOSPH6Q99547 160 aaKnown RBP14.12□□□□□ -0.15
USP11-208ENST00000480104 ITPR1Q14643 2758 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 FANCMQ8IYD8 2048 aa14.12□□□□□ -0.15
USP11-208ENST00000480104 KIAA1671Q9BY89 1806 aa14.11□□□□□ -0.15
USP11-208ENST00000480104 STK25O00506 426 aa14.11□□□□□ -0.15
USP11-208ENST00000480104 CAND2O75155 1236 aa14.11□□□□□ -0.15
USP11-208ENST00000480104 HOXB8P17481 243 aaPredicted RBP14.11□□□□□ -0.15
USP11-208ENST00000480104 MCCP23508 829 aa14.11□□□□□ -0.15
USP11-208ENST00000480104 SEPT14Q6ZU15 432 aa14.11□□□□□ -0.15
USP11-208ENST00000480104 RASGRP2Q7LDG7 609 aa14.11□□□□□ -0.15
USP11-208ENST00000480104 CMTR2Q8IYT2 770 aaKnown RBP14.11□□□□□ -0.15
USP11-208ENST00000480104 GOLIM4O00461 696 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 TREHO43280 583 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 PLA2G6O60733 806 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
USP11-208ENST00000480104 RNF207Q6ZRF8 634 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 ARPP21Q9UBL0 812 aaPredicted RBP14.1□□□□□ -0.15
USP11-208ENST00000480104 USP18Q9UMW8 372 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 SLC4A4Q9Y6R1 1079 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 WDFY3Q8IZQ1 3526 aa14.1□□□□□ -0.15
USP11-208ENST00000480104 CACNA1IQ9P0X4 2223 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 ENPP3O14638 875 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 PRDM1O75626 825 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 ZIC2O95409 532 aaPredicted RBP14.09□□□□□ -0.15
USP11-208ENST00000480104 WEE2P0C1S8 567 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 GHRP10912 638 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 ERVFC1P60507 584 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 RPS6P62753 249 aaKnown RBP14.09□□□□□ -0.15
USP11-208ENST00000480104 POLA2Q14181 598 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 SPECC1Q5M775 1068 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 CES5AQ6NT32 575 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 CLEC4DQ8WXI8 215 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 ADAM7Q9H2U9 754 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
USP11-208ENST00000480104 DUSP12Q9UNI6 340 aa14.09□□□□□ -0.15
USP11-208ENST00000480104 TTC3P53804 2025 aa14.08□□□□□ -0.15
USP11-208ENST00000480104 PLXNA4Q9HCM2 1894 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 FSCN2O14926 492 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms