RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 PLAGL2Q9UPG8 496 aa21.18■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L15C9J2P7 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L13C9JLJ4 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L11C9JVI0 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L18D6R9N7 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L22D6RA61 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L17D6RBQ6 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L19D6RCP7 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L20D6RJB6 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 ENTPD3O75355 529 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 APBA3O96018 575 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 CCDC172P0C7W6 258 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 FKBP3Q00688 224 aaKnown RBP21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L24Q0WX57 530 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 SPA17Q15506 151 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 ECM1Q16610 540 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 ABCB5Q2M3G0 1257 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 HAUS3Q68CZ6 603 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 USP17L6PQ6QN14 398 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 CEP63Q96MT8 703 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 EPC1Q9H2F5 836 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 RAB21Q9UL25 225 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 CEP83Q9Y592 693 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 SCN9AQ15858 1988 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 ATRNL1Q5VV63 1379 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 ERLIN1O75477 346 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 GNA14O95837 355 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 CACNB3P54284 484 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 SH3BP5LQ7L8J4 393 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 TRAPPC11Q7Z392 1133 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 CCDC42Q96M95 316 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 DRC1Q96MC2 740 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 ZSWIM4Q9H7M6 989 aa21.17■□□□□ 0.98
TNFRSF8-204ENST00000479933 EIF3JO75822 258 aaKnown RBP21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 ZCWPW2Q504Y3 356 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 ERMNQ8TAM6 284 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 KIAA1024Q9UPX6 916 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 ANO9A1A5B4 782 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 F5H6K3 240 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 KIF1CO43896 1103 aaKnown RBP21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 PLA2G4BP0C869 781 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 VAV2P52735 878 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 KLRC3Q07444 240 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 PAPD7Q5XG87 772 aaKnown RBP21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 RPAINQ86UA6 219 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 FBXO11Q86XK2 927 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 SIAH1Q8IUQ4 282 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 CRYGNQ8WXF5 182 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 CNKSR1Q969H4 720 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 ANKZF1Q9H8Y5 726 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 TRIM10Q9UDY6 481 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 COL4A3BPQ9Y5P4 624 aa21.16■□□□□ 0.98
TNFRSF8-204ENST00000479933 PITPNM2Q9BZ72 1349 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 FAM196BA6NMK8 535 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 MEIS2O14770 477 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 ARHGAP4P98171 946 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 KIF5AQ12840 1032 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 TRAF1Q13077 416 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 Q4G0T1 1027 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 RPGRIP1Q96KN7 1286 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 FAM107BQ9H098 131 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 GBP3Q9H0R5 595 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 DONSONQ9NYP3 566 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 SLX4Q8IY92 1834 aa21.15■□□□□ 0.98
TNFRSF8-204ENST00000479933 USO1O60763 962 aaKnown RBP21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 SSBP05455 408 aaKnown RBP eCLIP21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 SYDE2Q5VT97 1194 aa21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 HDXQ7Z353 690 aa21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 GPBP1Q86WP2 473 aa21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 PURBQ96QR8 312 aaKnown RBP21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 NUCKS1Q9H1E3 243 aaKnown RBP21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 MMRN2Q9H8L6 949 aa21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 SAR1BQ9Y6B6 198 aa21.14■□□□□ 0.98
TNFRSF8-204ENST00000479933 CKAP4Q07065 602 aaKnown RBP21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 LRRC41Q15345 812 aa21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 RBM26Q5T8P6 1007 aaKnown RBP21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 CC2D2BQ6DHV5 1058 aa21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 BTNL9Q6UXG8 535 aa21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 SUPT20HQ8NEM7 779 aa21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 FAM20AQ96MK3 541 aa21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 PCDHAC2Q9Y5I4 1007 aa21.14■□□□□ 0.97
TNFRSF8-204ENST00000479933 SPDYE3A6NKU9 549 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 E9PMD0 336 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 TRAF5O00463 557 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 LCA5LO95447 670 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 NDUFB10O96000 172 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 SLURP2P0DP57 97 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 FAM207AQ9NSI2 230 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 VPS18Q9P253 973 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 BMP3P12645 472 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 SREBF1P36956 1147 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 MARSP56192 900 aaKnown RBP21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 CCDC40Q4G0X9 1142 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 ETNPPLQ8TBG4 499 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 GJA10Q969M2 543 aa21.13■□□□□ 0.97
TNFRSF8-204ENST00000479933 POTEB3A0JP26 581 aa21.12■□□□□ 0.97
TNFRSF8-204ENST00000479933 FRMD3A2A2Y4 597 aa21.12■□□□□ 0.97
TNFRSF8-204ENST00000479933 POTECB2RU33 542 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms