RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 DHX8Q14562 1220 aaKnown RBP12.59□□□□□ -0.39
APTX-223ENST00000479656 FAM110CQ1W6H9 321 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 KCNK18Q7Z418 384 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 CATSPER3Q86XQ3 398 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 ERMNQ8TAM6 284 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 SMARCE1Q969G3 411 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 GPRASP2Q96D09 838 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 FGD4Q96M96 766 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 EIF2AK1Q9BQI3 630 aaKnown RBP12.59□□□□□ -0.39
APTX-223ENST00000479656 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
APTX-223ENST00000479656 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 KIAA1024Q9UPX6 916 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 LCTP09848 1927 aa12.58□□□□□ -0.39
APTX-223ENST00000479656 POTEB3A0JP26 581 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 MAFGO15525 162 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
APTX-223ENST00000479656 STAM2O75886 525 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
APTX-223ENST00000479656 SPATA31C1P0DKV0 1188 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 TM4SF4P48230 202 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
APTX-223ENST00000479656 PDE4DQ08499 809 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 DPYDQ12882 1025 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 CUL4BQ13620 913 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 TMEM119Q4V9L6 283 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 HYIQ5T013 277 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 POTEBQ6S5H4 581 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 B3GNT9Q6UX72 402 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 DNAJC25Q9H1X3 360 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 CUEDC2Q9H467 287 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 TBC1D22BQ9NU19 505 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 RGL1Q9NZL6 768 aa12.58□□□□□ -0.4
APTX-223ENST00000479656 E9PMD0 336 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
APTX-223ENST00000479656 EDNRBP24530 442 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 RPA1P27694 616 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 NLRP12P59046 1061 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 CYP4A11Q02928 519 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 MCM6Q14566 821 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 STX1AQ16623 288 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 DEFB115Q30KQ5 88 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 HAUS3Q68CZ6 603 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 SEPT14Q6ZU15 432 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 GPR142Q7Z601 462 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 NT5C3AQ9H0P0 336 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 ANO10Q9NW15 660 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 STK24Q9Y6E0 443 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 IVNS1ABPQ9Y6Y0 642 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 ADGRA2Q96PE1 1338 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 KDM3AQ9Y4C1 1321 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 SPATA31C2B4DYI2 1134 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 STRNO43815 780 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 TLR2O60603 784 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 COBLO75128 1261 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 SLITRK3O94933 977 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 SMC2O95347 1197 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 ADORA2AP29274 412 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 CTTNQ14247 550 aaKnown RBP12.57□□□□□ -0.4
APTX-223ENST00000479656 EPHA7Q15375 998 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 NT5DC1Q5TFE4 455 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 C17orf99Q6UX52 265 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 C11orf57Q6ZUT1 292 aaPredicted RBP12.57□□□□□ -0.4
APTX-223ENST00000479656 SV2BQ7L1I2 683 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 LARP4BQ92615 738 aaKnown RBP12.57□□□□□ -0.4
APTX-223ENST00000479656 RAD54LQ92698 747 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 HSD17B14Q9BPX1 270 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 POLR3CQ9BUI4 534 aaPredicted RBP12.57□□□□□ -0.4
APTX-223ENST00000479656 BCAS3Q9H6U6 928 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
APTX-223ENST00000479656 POTEFA5A3E0 1075 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 B4DLN1 442 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 SLC26A4O43511 780 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 AOC2O75106 756 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 MRE11P49959 708 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 PSMC6P62333 389 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 SP2Q02086 613 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 ZNF792Q3KQV3 632 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 DPCR1Q3MIW9 517 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 MIER3Q7Z3K6 550 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 PLEKHH3Q7Z736 793 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 TPH2Q8IWU9 490 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 ABRAQ8N0Z2 381 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 MAGEF1Q9HAY2 307 aa12.56□□□□□ -0.4
APTX-223ENST00000479656 SORBS3O60504 671 aa12.55□□□□□ -0.4
APTX-223ENST00000479656 KCNA2P16389 499 aa12.55□□□□□ -0.4
APTX-223ENST00000479656 BMP6P22004 513 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms