RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
USP42-206ENST00000479544 PDHA1P08559 390 aa14.76□□□□□ -0.05
USP42-206ENST00000479544 GBP1P32455 592 aa14.76□□□□□ -0.05
USP42-206ENST00000479544 MDM1Q8TC05 714 aa14.76□□□□□ -0.05
USP42-206ENST00000479544 VIPAS39Q9H9C1 493 aa14.76□□□□□ -0.05
USP42-206ENST00000479544 FRMD4BQ9Y2L6 1034 aa14.76□□□□□ -0.05
USP42-206ENST00000479544 DDX39AO00148 427 aaKnown RBP14.75□□□□□ -0.05
USP42-206ENST00000479544 RIMBP2O15034 1052 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 MAP2P11137 1827 aaKnown RBP14.75□□□□□ -0.05
USP42-206ENST00000479544 BIRC2Q13490 618 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 HHATQ5VTY9 493 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 PCDHA4Q9UN74 947 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 MAP2K7O14733 419 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 MDH1P40925 334 aaKnown RBP14.75□□□□□ -0.05
USP42-206ENST00000479544 POLE2P56282 527 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 TSNAXIP1Q2TAA8 658 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 BICD1Q96G01 975 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 ADAM33Q9BZ11 813 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 TXNDC9O14530 226 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 STXBP4Q6ZWJ1 553 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 SYCE1Q8N0S2 351 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 NUCKS1Q9H1E3 243 aaKnown RBP14.75□□□□□ -0.05
USP42-206ENST00000479544 INTUQ9ULD6 942 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 POC1B-GALNT4F8VUJ3 575 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 SUN1O94901 812 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 MAP3K14Q99558 947 aa14.75□□□□□ -0.05
USP42-206ENST00000479544 ACTR5Q9H9F9 607 aaPredicted RBP14.75□□□□□ -0.05
USP42-206ENST00000479544 TULP2O00295 520 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 MYBL2P10244 700 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 SGMS1Q86VZ5 419 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 EPN3Q9H201 632 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 ADGRB2O60241 1585 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 MYBL1P10243 752 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 ZNF18P17022 549 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 SCP2P22307 547 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 PDIA6Q15084 440 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 RABL6Q3YEC7 729 aaPredicted RBP14.74□□□□□ -0.05
USP42-206ENST00000479544 NLRP10Q86W26 655 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 EYA3Q99504 573 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 VPS37BQ9H9H4 285 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 DNM3Q9UQ16 869 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 THAP12O43422 761 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 BAG2O95816 211 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 KCNQ4P56696 695 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 FAM83BQ5T0W9 1011 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 CCDC13Q8IYE1 715 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 SMC6Q96SB8 1091 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 BCS1LQ9Y276 419 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 COL4A3BPQ9Y5P4 624 aa14.74□□□□□ -0.05
USP42-206ENST00000479544 TARSL2A2RTX5 802 aaKnown RBP14.73□□□□□ -0.05
USP42-206ENST00000479544 ADCY8P40145 1251 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 TRAPPC10P48553 1259 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 DPH6Q7L8W6 267 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 TRAPPC11Q7Z392 1133 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 SLC44A5Q8NCS7 719 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 SLC40A1Q9NP59 571 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 PLCB1Q9NQ66 1216 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 HEG1Q9ULI3 1381 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 MAP3K15Q6ZN16 1313 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 WDR91A4D1P6 747 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 PRR16Q569H4 304 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 TPH2Q8IWU9 490 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 KIF2BQ8N4N8 673 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 SFI1A8K8P3 1242 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 PSMD14O00487 310 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
USP42-206ENST00000479544 PPP2R2AP63151 447 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 RASIP1Q5U651 963 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
USP42-206ENST00000479544 NEK9Q8TD19 979 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 PIGSQ96S52 555 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 RAB21Q9UL25 225 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 USH1CQ9Y6N9 552 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 ABCC12Q96J65 1359 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 RASGRF2O14827 1237 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 ATP2A1O14983 1001 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 SART1O43290 800 aaKnown RBP14.72□□□□□ -0.05
USP42-206ENST00000479544 DDAH1O94760 285 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 COPB2P35606 906 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 SLC16A2P36021 539 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 WDR93Q6P2C0 686 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 SRBD1Q8N5C6 995 aaKnown RBP14.72□□□□□ -0.05
USP42-206ENST00000479544 ZMYND12Q9H0C1 365 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 PDE2AO00408 941 aaPredicted RBP14.72□□□□□ -0.05
USP42-206ENST00000479544 DIAPH2O60879 1101 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 SERPING1P05155 500 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 PDHBP11177 359 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 RFC4P35249 363 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 DIXDC1Q155Q3 683 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 EARS2Q5JPH6 523 aaKnown RBP14.72□□□□□ -0.05
USP42-206ENST00000479544 ADSSL1Q8N142 457 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 DDX12PQ92771 950 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
USP42-206ENST00000479544 CDC25CP30307 473 aa14.71□□□□□ -0.05
USP42-206ENST00000479544 ATP2C1P98194 919 aaPredicted RBP14.71□□□□□ -0.05
USP42-206ENST00000479544 PARP10Q53GL7 1025 aa14.71□□□□□ -0.05
USP42-206ENST00000479544 SCYL3Q8IZE3 742 aa14.71□□□□□ -0.05
USP42-206ENST00000479544 STAG2Q8N3U4 1231 aa14.71□□□□□ -0.05
USP42-206ENST00000479544 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms