RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 TAL1P17542 331 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 TERF1P54274 439 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 TYRO3Q06418 890 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 KRT32Q14532 448 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 RAB3GAP1Q15042 981 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 TRIP4Q15650 581 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 ENOX2Q16206 610 aaKnown RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 DEFB115Q30KQ5 88 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 CCDC178Q5BJE1 867 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 LDLRAD1Q5T700 205 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 RGMBQ6NW40 437 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 TMEM179Q6ZVK1 233 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 IQCA1Q86XH1 822 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 ERO1BQ86YB8 467 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 CMTR1Q8N1G2 835 aaKnown RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 NCOA7Q8NI08 942 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 ESR2Q92731 530 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 ZKSCAN4Q969J2 545 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 CEP63Q96MT8 703 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 DUSP9Q99956 384 aaKnown RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 IL25Q9H293 177 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 SH2D4AQ9H788 454 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 ELP3Q9H9T3 547 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 PRDM6Q9NQX0 595 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 ERICH2A1L162 156 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 RASSF10A6NK89 507 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 SLC27A2O14975 620 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 ORC4O43929 436 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 GH2P01242 217 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 CYP21A2P08686 494 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 ZBTB48P10074 688 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-209ENST00000479532 EPB42P16452 691 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 VAMP1P23763 118 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 SHMT1P34896 483 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 PPATQ06203 517 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 GRM1Q13255 1194 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 PPIL2Q13356 520 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 LAMC2Q13753 1193 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 SART3Q15020 963 aaKnown RBP7.23□□□□□ -1.25
SF3B1-209ENST00000479532 CREB3L3Q68CJ9 461 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-209ENST00000479532 MOB2Q70IA6 237 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 SLC44A5Q8NCS7 719 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 OPTNQ96CV9 577 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 FEZ1Q99689 392 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 DNAJC18Q9H819 358 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 KANSL2Q9H9L4 492 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 IGSF5Q9NSI5 407 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 ZBTB21Q9ULJ3 1066 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
SF3B1-209ENST00000479532 FZD1Q9UP38 647 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 KCNMB2Q9Y691 235 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 SNCAIPQ9Y6H5 919 aa7.23□□□□□ -1.25
SF3B1-209ENST00000479532 MANSC4A6NHS7 340 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 E7EWF7 191 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 EIF1AYO14602 144 aaKnown RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 PRDM1O75626 825 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 HMGB1P09429 215 aaKnown RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 AKR1B1P15121 316 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 PTPRAP18433 802 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 PSMA5P28066 241 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 GRNP28799 593 aaKnown RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 HSPA4P34932 840 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 GTF2A2P52657 109 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 USP14P54578 494 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 RBM10P98175 930 aaKnown RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 TFAP4Q01664 338 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 ICA1Q05084 483 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 SREBF2Q12772 1141 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 NOGQ13253 232 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 SNAPC2Q13487 334 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 NECTIN1Q15223 517 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 OTUD7BQ6GQQ9 843 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 ZNF438Q7Z4V0 828 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 MTERF4Q7Z6M4 381 aaKnown RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 RASAL3Q86YV0 1011 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 TBC1D10CQ8IV04 446 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 MICALL1Q8N3F8 863 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 WNK4Q96J92 1243 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 CLMNQ96JQ2 1002 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 CAPNS2Q96L46 248 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 UBAC1Q9BSL1 405 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 USP26Q9BXU7 913 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 KRTAP4-2Q9BYR5 136 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 RNF19AQ9NV58 838 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 TMOD4Q9NZQ9 345 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 PARP2Q9UGN5 583 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 HCN2Q9UL51 889 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 FNDC3AQ9Y2H6 1198 aaKnown RBP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.22□□□□□ -1.25
SF3B1-209ENST00000479532 ZHX2Q9Y6X8 837 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 MYH4Q9Y623 1939 aa7.22□□□□□ -1.25
SF3B1-209ENST00000479532 PLIN4Q96Q06 1357 aa7.21□□□□□ -1.25
SF3B1-209ENST00000479532 B4E1Z4 1266 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 C19orf81C9J6K1 198 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 CXCL11O14625 94 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 TTLL1O95922 423 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 RECKO95980 971 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 FGRP09769 529 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms