RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TTLL6Q8N841 843 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 PARVGQ9HBI0 331 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 RRP15Q9Y3B9 282 aaKnown RBP15.66■□□□□ 0.1
COL20A1-206ENST00000479501 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 F5H6K3 240 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 HGSO14964 777 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 KLRC3Q07444 240 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 DMP1Q13316 513 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 QRICH1Q2TAL8 776 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 FAM71BQ8TC56 605 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 CSADQ9Y600 493 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 FLT1P17948 1338 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 UBE2Q2LH0YL09 131 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 DLATP10515 647 aaKnown RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 LIG4P49917 911 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 RCSD1Q6JBY9 416 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 DCUN1D2Q6PH85 259 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 LMNTD2Q8IXW0 634 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 ANKRD35Q8N283 1001 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 FAM133AQ8N9E0 248 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 FUCA2Q9BTY2 467 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 PPANQ9NQ55 473 aaKnown RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 PRPF6O94906 941 aaKnown RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 CD19P15391 556 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 CCZ1BP86790 482 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 CCZ1P86791 482 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 ARHGAP4P98171 946 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 SEMA3FQ13275 785 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 PAXIP1Q6ZW49 1069 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-206ENST00000479501 RAB17Q9H0T7 212 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 ADGRG1Q9Y653 693 aa15.65■□□□□ 0.1
COL20A1-206ENST00000479501 ECE2O60344 883 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 CEP85LQ5SZL2 805 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 RAD54LQ92698 747 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 GINS2Q9Y248 185 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 USTQ9Y2C2 406 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 E9PMD0 336 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 KLRK1P26718 216 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 GRIN1Q05586 938 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 SF3A3Q12874 501 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL20A1-206ENST00000479501 NAA30Q147X3 362 aaPredicted RBP15.64■□□□□ 0.09
COL20A1-206ENST00000479501 PTPAQ15257 358 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 IVNS1ABPQ9Y6Y0 642 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 CNTNAP5Q8WYK1 1306 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 H0YCG3 227 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 ASNSP08243 561 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 RASA1P20936 1047 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 MYL7Q01449 175 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 KCNB1Q14721 858 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 PPP2R5EQ16537 467 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 RTKN2Q8IZC4 609 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 TTC26A0AVF1 554 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 SORBS3O60504 671 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 CTTNQ14247 550 aaKnown RBP15.64■□□□□ 0.09
COL20A1-206ENST00000479501 TERF2Q15554 542 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 KRT71Q3SY84 523 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 RBM43Q6ZSC3 357 aaKnown RBP15.64■□□□□ 0.09
COL20A1-206ENST00000479501 STMN2Q93045 179 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 RIOK1Q9BRS2 568 aaKnown RBP15.64■□□□□ 0.09
COL20A1-206ENST00000479501 CAPS2Q9BXY5 557 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 AGTPBP1Q9UPW5 1226 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 PCDHA13Q9Y5I0 950 aa15.64■□□□□ 0.09
COL20A1-206ENST00000479501 COL5A2P05997 1499 aaPredicted RBP15.63■□□□□ 0.09
COL20A1-206ENST00000479501 MTMR3Q13615 1198 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 E4F1Q66K89 784 aaPredicted RBP15.63■□□□□ 0.09
COL20A1-206ENST00000479501 FBXL16Q8N461 479 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 POMGNT1Q8WZA1 660 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 PAGR1Q9BTK6 254 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 C1orf112Q9NSG2 853 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
COL20A1-206ENST00000479501 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 SERPING1P05155 500 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 LMNB1P20700 586 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 SLC10A5Q5PT55 438 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 VSIG1Q86XK7 387 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 PROM2Q8N271 834 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 GUF1Q8N442 669 aaKnown RBP15.63■□□□□ 0.09
COL20A1-206ENST00000479501 ATP6V0A1Q93050 837 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 MLXIPQ9HAP2 919 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL20A1-206ENST00000479501 ADAMTS1Q9UHI8 967 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 MOCS3O95396 460 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 CXCR5P32302 372 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 ATP1A2P50993 1020 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 DPYDQ12882 1025 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 MICAL1Q8TDZ2 1067 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 GCNT4Q9P109 453 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 UBR1Q8IWV7 1749 aa15.63■□□□□ 0.09
COL20A1-206ENST00000479501 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
COL20A1-206ENST00000479501 POTECB2RU33 542 aa15.62■□□□□ 0.09
COL20A1-206ENST00000479501 ZMYND10O75800 440 aa15.62■□□□□ 0.09
COL20A1-206ENST00000479501 CCT5P48643 541 aa15.62■□□□□ 0.09
COL20A1-206ENST00000479501 GUCY2DQ02846 1103 aa15.62■□□□□ 0.09
COL20A1-206ENST00000479501 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
COL20A1-206ENST00000479501 TRIM9Q9C026 710 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms