RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ANKRD33Q7Z3H0 272 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 TBCKQ8TEA7 893 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 PKD2L1Q9P0L9 805 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 H0YGN5 161 aa23.29■■□□□ 1.32
VARS-224ENST00000479051 SAFBQ15424 915 aaKnown RBP eCLIP23.29■■□□□ 1.32
VARS-224ENST00000479051 CYP2W1Q8TAV3 490 aa23.29■■□□□ 1.32
VARS-224ENST00000479051 C8orf76Q96K31 380 aa23.29■■□□□ 1.32
VARS-224ENST00000479051 GJB4Q9NTQ9 266 aa23.29■■□□□ 1.32
VARS-224ENST00000479051 FAM86B1E9PN63 330 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 ATP9AO75110 1047 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 CD2BP2O95400 341 aaKnown RBP23.28■■□□□ 1.32
VARS-224ENST00000479051 CLTBP09497 229 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 FAM86B2P0C5J1 330 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 HOXD8P13378 290 aaPredicted RBP23.28■■□□□ 1.32
VARS-224ENST00000479051 CDK7P50613 346 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 FOSBP53539 338 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 PSMC6P62333 389 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 SP4Q02446 784 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 KRT40Q6A162 431 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 SLC43A3Q8NBI5 491 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 AGO4Q9HCK5 861 aaKnown RBP23.28■■□□□ 1.32
VARS-224ENST00000479051 PRDM5Q9NQX1 630 aaPredicted RBP23.28■■□□□ 1.32
VARS-224ENST00000479051 ZMYND8Q9ULU4 1186 aaPredicted RBP23.28■■□□□ 1.32
VARS-224ENST00000479051 NFASCO94856 1347 aa23.28■■□□□ 1.32
VARS-224ENST00000479051 MMP1P03956 469 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 ARP10275 920 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 CHMP4BP1P59074 171 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 PRR16Q569H4 304 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 NFRKBQ6P4R8 1299 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 GPR20Q99678 358 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 JPH1Q9HDC5 661 aaPredicted RBP23.27■■□□□ 1.32
VARS-224ENST00000479051 TCEAL9Q9UHQ7 104 aa23.27■■□□□ 1.32
VARS-224ENST00000479051 IGLV3-22A0A075B6J6 115 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 F2P00734 622 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 ZNF286BP0CG31 522 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 PTPN11Q06124 597 aaPredicted RBP23.26■■□□□ 1.31
VARS-224ENST00000479051 NBPF20Q3BBV1 942 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 FAM47CQ5HY64 1035 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 SEPT1Q8WYJ6 367 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 NAP1L4Q99733 375 aaKnown RBP23.26■■□□□ 1.31
VARS-224ENST00000479051 ZNF577Q9BSK1 485 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 BCAS3Q9H6U6 928 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 SLC9A2Q9UBY0 812 aa23.26■■□□□ 1.31
VARS-224ENST00000479051 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.26■■□□□ 1.31
VARS-224ENST00000479051 IPO5O00410 1097 aaKnown RBP23.25■■□□□ 1.31
VARS-224ENST00000479051 PSEN2P49810 448 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 INF2Q27J81 1249 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 MOXD1Q6UVY6 613 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 PIK3AP1Q6ZUJ8 805 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 NEK8Q86SG6 692 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 FAM126BQ8IXS8 530 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 DIS3L2Q8IYB7 885 aaKnown RBP23.25■■□□□ 1.31
VARS-224ENST00000479051 OXER1Q8TDS5 423 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 PDLIM7Q9NR12 457 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 TMEM39AQ9NV64 488 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 ZNF215Q9UL58 517 aaPredicted RBP23.25■■□□□ 1.31
VARS-224ENST00000479051 GRIN2DO15399 1336 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 SCN10AQ9Y5Y9 1956 aa23.25■■□□□ 1.31
VARS-224ENST00000479051 LGALS2P05162 132 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 SUPT20HL2P0C7V6 817 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 SYN1P17600 705 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 MFSD10Q14728 455 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 KAT2BQ92831 832 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 LBHD1Q9BQE6 289 aaPredicted RBP23.24■■□□□ 1.31
VARS-224ENST00000479051 TBC1D22BQ9NU19 505 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 DNAH12Q6ZR08 3092 aa23.24■■□□□ 1.31
VARS-224ENST00000479051 GUCY1B3Q02153 619 aa23.23■■□□□ 1.31
VARS-224ENST00000479051 FAAP100Q0VG06 881 aa23.23■■□□□ 1.31
VARS-224ENST00000479051 NR5A1Q13285 461 aa23.23■■□□□ 1.31
VARS-224ENST00000479051 ITGB3BPQ13352 177 aaPredicted RBP23.23■■□□□ 1.31
VARS-224ENST00000479051 LETM2Q2VYF4 491 aa23.23■■□□□ 1.31
VARS-224ENST00000479051 C7orf31Q8N865 590 aa23.23■■□□□ 1.31
VARS-224ENST00000479051 DOCK5Q9H7D0 1870 aa23.23■■□□□ 1.31
VARS-224ENST00000479051 CYP3A7-CYP3A51PA0A087WV96 503 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 BTBD18B2RXH4 712 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 H3BRB1 525 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 GCFC2P16383 781 aaKnown RBP23.22■■□□□ 1.31
VARS-224ENST00000479051 CYP3A7P24462 503 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 TCF7P36402 384 aaPredicted RBP23.22■■□□□ 1.31
VARS-224ENST00000479051 GNL2Q13823 731 aaKnown RBP23.22■■□□□ 1.31
VARS-224ENST00000479051 KIAA0753Q2KHM9 967 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 Q4G0T1 1027 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 UTP14CQ5TAP6 766 aaKnown RBP23.22■■□□□ 1.31
VARS-224ENST00000479051 SESTD1Q86VW0 696 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 FBXO18Q8NFZ0 1043 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 C16orf70Q9BSU1 422 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 TUT1Q9H6E5 874 aaKnown RBP23.22■■□□□ 1.31
VARS-224ENST00000479051 SMC3Q9UQE7 1217 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 NOD1Q9Y239 953 aa23.22■■□□□ 1.31
VARS-224ENST00000479051 HAS3O00219 553 aa23.21■■□□□ 1.31
VARS-224ENST00000479051 KIAA0355O15063 1070 aa23.21■■□□□ 1.31
VARS-224ENST00000479051 CD4P01730 458 aa23.21■■□□□ 1.31
VARS-224ENST00000479051 LENG9Q96B70 501 aa23.21■■□□□ 1.31
VARS-224ENST00000479051 AZI2Q9H6S1 392 aa23.21■■□□□ 1.31
VARS-224ENST00000479051 DDX25Q9UHL0 483 aaKnown RBP23.21■■□□□ 1.31
VARS-224ENST00000479051 GSTTP1A0A1W2PQM5 241 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 DDX39AO00148 427 aaKnown RBP23.2■■□□□ 1.3
VARS-224ENST00000479051 B4GALT4O60513 344 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 TDP2O95551 362 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 RAG1P15918 1043 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms