RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 GLIS3Q8NEA6 775 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 NDST4Q9H3R1 872 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 MYH3P11055 1940 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 ADAMTS2O95450 1211 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 MFN1Q8IWA4 741 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 ALS2CR12Q96Q35 445 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 CCSER1Q9C0I3 900 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 RMI1Q9H9A7 625 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 RGL1Q9NZL6 768 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZNF142P52746 1687 aaPredicted RBP12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 FAM170AA1A519 330 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 FTCDO95954 541 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 FESP07332 822 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 SLC1A4P43007 532 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 BZW1Q7L1Q6 419 aaKnown RBP12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 STIM2Q9P246 746 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 NFU1Q9UMS0 254 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 PLAGL2Q9UPG8 496 aa12.14□□□□□ -0.47
LRRFIP1-211ENST00000478958 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TPP2P29144 1249 aaPredicted RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 SIK1P57059 783 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 NOC3LQ8WTT2 800 aaKnown RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 GJA10Q969M2 543 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 PLEKHG4BQ96PX9 1271 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TBC1D7Q9P0N9 293 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 MYH10P35580 1976 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 COL4A1P02462 1669 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 FLT1P17948 1338 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 STXBP3O00186 592 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 HSF2BPO75031 334 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 KIF4AO95239 1232 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 PCP11498 1178 aaKnown RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 PAPOLAP51003 745 aaKnown RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 SETDB1Q15047 1291 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TRADDQ15628 312 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TTMPQ5BVD1 217 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 FUKQ8N0W3 1084 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TBCKQ8TEA7 893 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TBC1D5Q92609 795 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 ERGIC2Q96RQ1 377 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 TMEM260Q9NX78 707 aa12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
LRRFIP1-211ENST00000478958 POTEMA6NI47 508 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 GLI1P08151 1106 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 GUCY2DQ02846 1103 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 CALML4Q96GE6 196 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 CDK5RAP3Q96JB5 506 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 CCDC43Q96MW1 224 aaKnown RBP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 EPAS1Q99814 870 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 MAF1Q9H063 256 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 EPB41L5Q9HCM4 733 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 BARHL2Q9NY43 387 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 FAM153AQ9UHL3 310 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 NUP98P52948 1817 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 MYMKA6NI61 221 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 SPDYE3A6NKU9 549 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 M0R2N6 131 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 DNAAF5Q86Y56 855 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 MAPKAPK5Q8IW41 473 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms