RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SLC7A5Q01650 507 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 RASSF7Q02833 373 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 SPA17Q15506 151 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 CCDC170Q8IYT3 715 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 TXLNBQ8N3L3 684 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 SWAP70Q9UH65 585 aa11.97□□□□□ -0.49
VPS52-217ENST00000478934 A0A1W2PQJ5 194 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 MMP10P09238 476 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 GPS2Q13227 327 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
VPS52-217ENST00000478934 CCDC40Q4G0X9 1142 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 COBLL1Q53SF7 1204 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
VPS52-217ENST00000478934 SCFD1Q8WVM8 642 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 MTMR8Q96EF0 704 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 PURBQ96QR8 312 aaKnown RBP11.96□□□□□ -0.49
VPS52-217ENST00000478934 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 PCDHA2Q9Y5H9 948 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.49
VPS52-217ENST00000478934 POTEB2H3BUK9 544 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 CYP11B2P19099 503 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 POLD1P28340 1107 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.5
VPS52-217ENST00000478934 PABPC4Q13310 644 aaKnown RBP eCLIP11.96□□□□□ -0.53e-6■■■□□ 15.2
VPS52-217ENST00000478934 GPATCH4Q5T3I0 446 aaKnown RBP11.96□□□□□ -0.5
VPS52-217ENST00000478934 TAF3Q5VWG9 929 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 HGSNATQ68CP4 663 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 CACNA2D4Q7Z3S7 1137 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 RABEP2Q9H5N1 569 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 FAM204AQ9H8W3 233 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.5
VPS52-217ENST00000478934 SPATA31A6Q5VVP1 1343 aa11.96□□□□□ -0.5
VPS52-217ENST00000478934 FAM86B1E9PN63 330 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 TRIM66O15016 1216 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 FAM86B2P0C5J1 330 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 ACTN1P12814 892 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 POLR2FP61218 127 aaKnown RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 ORC2Q13416 577 aaPredicted RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 FIGNQ5HY92 759 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 CATSPER3Q86XQ3 398 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 CREG2Q8IUH2 290 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 MS4A14Q96JA4 679 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 LSM14BQ9BX40 385 aaKnown RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 TRPC5Q9UL62 973 aaPredicted RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 COL4A3BPQ9Y5P4 624 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 SFI1A8K8P3 1242 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 RSPH10B2B2RC85 870 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 F5H6K3 240 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 EIF3JO75822 258 aaKnown RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 RSPH10BP0C881 870 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 NPR1P16066 1061 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 MAGEA1P43355 309 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 KLRC3Q07444 240 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 SEMA3FQ13275 785 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 PTPROQ16827 1216 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 TDRD12Q587J7 1177 aaKnown RBP11.95□□□□□ -0.5
VPS52-217ENST00000478934 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 PDXDC1Q6P996 788 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 HHIPL2Q6UWX4 724 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 TBC1D5Q92609 795 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 LTBP1Q14766 1721 aa11.95□□□□□ -0.5
VPS52-217ENST00000478934 ZBTB39O15060 712 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 KRT18P05783 430 aaKnown RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 CHRNA5P30532 468 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 HNRNPH3P31942 346 aaKnown RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 KCNA1Q09470 495 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 EXOC4Q96A65 974 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 TSG101Q99816 390 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 PACSIN1Q9BY11 444 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 A0A1W2PRG0 241 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 RNF40O75150 1001 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 SYF2O95926 243 aaKnown RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 UBXN2AP68543 259 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 ARHGAP4P98171 946 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 CDK17Q00537 523 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 ICA1Q05084 483 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 ASTE1Q2TB18 679 aaPredicted RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 PPP1R18Q6NYC8 613 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 LRRC1Q9BTT6 524 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 RGL1Q9NZL6 768 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 DMGDHQ9UI17 866 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms