RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 SYNE3Q6ZMZ3 975 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 SEPT14Q6ZU15 432 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 CMTR1Q8N1G2 835 aaKnown RBP18.19■□□□□ 0.5
GARNL3-215ENST00000478702 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
GARNL3-215ENST00000478702 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 KLF18A0A0U1RQI7 1052 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 GH1P01241 217 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 CXCL10P02778 98 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 SELPP16109 830 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 HOXA13P31271 388 aaPredicted RBP18.18■□□□□ 0.5
GARNL3-215ENST00000478702 KCNJ6P48051 423 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 RTN1Q16799 776 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 ARHGEF16Q5VV41 709 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 LRRC8DQ7L1W4 858 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 KHSRPQ92945 711 aaKnown RBP eCLIP18.18■□□□□ 0.5
GARNL3-215ENST00000478702 HLA-CQ95604 372 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 GTF2IRD1Q9UHL9 959 aa18.18■□□□□ 0.5
GARNL3-215ENST00000478702 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 GOLGA8BA8MQT2 603 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
GARNL3-215ENST00000478702 POLR2MP0CAP2 368 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 CKBP12277 381 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 CASTP20810 708 aaKnown RBP18.17■□□□□ 0.5
GARNL3-215ENST00000478702 CNKSR3Q6P9H4 555 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 TRAF7Q6Q0C0 670 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 FBXL16Q8N461 479 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 CCDC155Q8N6L0 562 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 GDPD5Q8WTR4 605 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 WNT8BQ93098 351 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 FAM122AQ96E09 287 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 PDCD2LQ9BRP1 358 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 LRFN3Q9BTN0 628 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 AGXT2Q9BYV1 514 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 HDAC6Q9UBN7 1215 aa18.17■□□□□ 0.5
GARNL3-215ENST00000478702 DDX41Q9UJV9 622 aaKnown RBP18.17■□□□□ 0.5
GARNL3-215ENST00000478702 NR3C2P08235 984 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 PSMA5P28066 241 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 FGD1P98174 961 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 FUT2Q10981 343 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 PGM5Q15124 567 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 STXBP2Q15833 593 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
GARNL3-215ENST00000478702 Q6ZUG5 572 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 IL31RAQ8NI17 732 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 BRF1Q92994 677 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 KAT6AQ92794 2004 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 RALGAPA2Q2PPJ7 1873 aa18.16■□□□□ 0.5
GARNL3-215ENST00000478702 HAS3O00219 553 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 GJB5O95377 273 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 PSEN2P49810 448 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 APOBRQ0VD83 1088 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 EMID1Q96A84 441 aaPredicted RBP18.15■□□□□ 0.5
GARNL3-215ENST00000478702 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 SUGCTQ9HAC7 445 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 FAM217BQ9NTX9 383 aaPredicted RBP18.15■□□□□ 0.5
GARNL3-215ENST00000478702 LMCD1Q9NZU5 365 aa18.15■□□□□ 0.5
GARNL3-215ENST00000478702 hCG_1642624A0A1W2PR95 340 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 PIK3CDO00329 1044 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 F2P00734 622 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 CDC27P30260 824 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 HIC1Q14526 733 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 MBTPS1Q14703 1052 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 DGKDQ16760 1214 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 CCDC82Q8N4S0 544 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 ZBED2Q9BTP6 218 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 CD320Q9NPF0 282 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 C11orf16Q9NQ32 467 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 MTUS1Q9ULD2 1270 aa18.14■□□□□ 0.49
GARNL3-215ENST00000478702 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
GARNL3-215ENST00000478702 PARNO95453 639 aaKnown RBP18.13■□□□□ 0.49
GARNL3-215ENST00000478702 ZNF286BP0CG31 522 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 METAP2P50579 478 aaKnown RBP eCLIP18.13■□□□□ 0.49
GARNL3-215ENST00000478702 ERVK-21P61565 698 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 ZNF200P98182 395 aaPredicted RBP18.13■□□□□ 0.49
GARNL3-215ENST00000478702 MFSD10Q14728 455 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 ZNF618Q5T7W0 954 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 RUFY3Q7L099 469 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 GPKOWQ92917 476 aaPredicted RBP eCLIP18.13■□□□□ 0.49
GARNL3-215ENST00000478702 TM6SF1Q9BZW5 370 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 ZSWIM6Q9HCJ5 1215 aa18.13■□□□□ 0.49
GARNL3-215ENST00000478702 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
GARNL3-215ENST00000478702 ABHD14A-ACY1A0A1B0GW23 586 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 MEIS2O14770 477 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 RGS20O76081 388 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 MYCLP12524 364 aaPredicted RBP18.12■□□□□ 0.49
GARNL3-215ENST00000478702 HOXD8P13378 290 aaPredicted RBP18.12■□□□□ 0.49
GARNL3-215ENST00000478702 CCND2P30279 289 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
GARNL3-215ENST00000478702 PTK7Q13308 1070 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
GARNL3-215ENST00000478702 KIAA0753Q2KHM9 967 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 PPP1R18Q6NYC8 613 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 USP17L6PQ6QN14 398 aa18.12■□□□□ 0.49
GARNL3-215ENST00000478702 HEATR3Q7Z4Q2 680 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms