RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 RANBP6O60518 1105 aaKnown RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 ZFYP08048 801 aaPredicted RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 ICAM3P32942 547 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 NRIP1P48552 1158 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 BTG3Q14201 252 aaPredicted RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 HIC1Q14526 733 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 PTPN21Q16825 1174 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 USH1GQ495M9 461 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 EFHBQ8N7U6 833 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 NSUN6Q8TEA1 469 aaKnown RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 RIPOR3Q96MK2 946 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 PLVAPQ9BX97 442 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
TCTN3-205ENST00000478245 MRVI1Q9Y6F6 885 aa11.05□□□□□ -0.64
TCTN3-205ENST00000478245 SPTBN2O15020 2390 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 KMT2BQ9UMN6 2715 aaPredicted RBP11.04□□□□□ -0.64
TCTN3-205ENST00000478245 M0R2C6 588 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 SORBS3O60504 671 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 PPFIA4O75335 1185 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
TCTN3-205ENST00000478245 FRMD5Q7Z6J6 570 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 ADGRD2Q7Z7M1 963 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 CLP1Q92989 425 aaKnown RBP11.04□□□□□ -0.64
TCTN3-205ENST00000478245 TAAR1Q96RJ0 339 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
TCTN3-205ENST00000478245 PLAGL2Q9UPG8 496 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
TCTN3-205ENST00000478245 FRYLO94915 3013 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 DMDP11532 3685 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 CAND2O75155 1236 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 MCTP2Q6DN12 878 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 SPATA33Q96N06 139 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 RMDN3Q96TC7 470 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 TOMM22Q9NS69 142 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 PLXNA4Q9HCM2 1894 aa11.03□□□□□ -0.64
TCTN3-205ENST00000478245 TREHO43280 583 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.65
TCTN3-205ENST00000478245 LINC00271P0C7V0 271 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
TCTN3-205ENST00000478245 ATF7P17544 494 aaPredicted RBP11.02□□□□□ -0.65
TCTN3-205ENST00000478245 CAMK1Q14012 370 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 ARHGEF16Q5VV41 709 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 SYTL5Q8TDW5 730 aaPredicted RBP11.02□□□□□ -0.65
TCTN3-205ENST00000478245 TBC1D5Q92609 795 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 P2RX5Q93086 422 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 TLE6Q9H808 572 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 ECHDC1Q9NTX5 307 aa11.02□□□□□ -0.65
TCTN3-205ENST00000478245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
TCTN3-205ENST00000478245 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 MED19A0JLT2 244 aaPredicted RBP11.01□□□□□ -0.65
TCTN3-205ENST00000478245 H3BRB1 525 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 KRT37O76014 449 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 RGS20O76081 388 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 GLP2RO95838 553 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 ITGB1P05556 798 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 SMIM10L2AP0DMW4 78 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 SMIM10L2BP0DMW5 78 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 GNAT1P11488 350 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
TCTN3-205ENST00000478245 EIF2AK2P19525 551 aaKnown RBP11.01□□□□□ -0.65
TCTN3-205ENST00000478245 DNAJB1P25685 340 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 NAALADL2Q58DX5 795 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 MYSM1Q5VVJ2 828 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 DGLUCYQ7Z3D6 616 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 MCF2L2Q86YR7 1114 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 TMEM105Q8N8V8 129 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 SPPL3Q8TCT6 385 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 PANK1Q8TE04 598 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 GPATCH3Q96I76 525 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 TMEM47Q9BQJ4 181 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 LRRCC1Q9C099 1032 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 RNPEPQ9H4A4 650 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
TCTN3-205ENST00000478245 DOCK5Q9H7D0 1870 aa11.01□□□□□ -0.65
TCTN3-205ENST00000478245 SMARCA5O60264 1052 aaPredicted RBP11□□□□□ -0.65
TCTN3-205ENST00000478245 GGPS1O95749 300 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 NR3C2P08235 984 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 PDHBP11177 359 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 SP100P23497 879 aaPredicted RBP11□□□□□ -0.65
TCTN3-205ENST00000478245 ZNF543Q08ER8 600 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
TCTN3-205ENST00000478245 CELF3Q5SZQ8 465 aaKnown RBP11□□□□□ -0.65
TCTN3-205ENST00000478245 KCNV1Q6PIU1 500 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 SIRT2Q8IXJ6 389 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 UBALD2Q8IYN6 164 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 KLHL23Q8NBE8 558 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 KREMEN2Q8NCW0 462 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 POF1BQ8WVV4 589 aa11□□□□□ -0.65
TCTN3-205ENST00000478245 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
TCTN3-205ENST00000478245 NEK1Q96PY6 1258 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms