RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 TRIM68Q6AZZ1 485 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 SLC30A9Q6PML9 568 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 TMC3Q7Z5M5 1100 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 TLCD1Q96CP7 247 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 CELF4Q9BZC1 486 aaKnown RBP10.79□□□□□ -0.68
COL13A1-207ENST00000478219 DISC1Q9NRI5 854 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 ADAM22Q9P0K1 906 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 ZMYND8Q9ULU4 1186 aaPredicted RBP10.79□□□□□ -0.68
COL13A1-207ENST00000478219 GRID2IPA4D2P6 1211 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 F8VZ95 297 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 KCNK3O14649 394 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 RHOBTB3O94955 611 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 GSTA1P08263 222 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 PAPOLAP51003 745 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 UBE3CQ15386 1083 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 ENOX2Q16206 610 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 CCDC57Q2TAC2 916 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 CWF19L1Q69YN2 538 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 SYNE4Q8N205 404 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 STAG2Q8N3U4 1231 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 C4orf32Q8N8J7 132 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 PRMT1Q99873 361 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 SELENOSQ9BQE4 189 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 ECT2Q9H8V3 914 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 NLRC4Q9NPP4 1024 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 PAPOLBQ9NRJ5 636 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 NKX1-2Q9UD57 310 aaPredicted RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 AMACRQ9UHK6 382 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 ATRNO75882 1429 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 SMIM23A6NLE4 172 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 HGSO14964 777 aaPredicted RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 AHCYL1O43865 530 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 LGR5O75473 907 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 RTN3O95197 1032 aaPredicted RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 PHKA1P46020 1223 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 IFNAR2P48551 515 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 IFI35P80217 286 aaPredicted RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 TDRD12Q587J7 1177 aaKnown RBP10.78□□□□□ -0.68
COL13A1-207ENST00000478219 SLC17A8Q8NDX2 589 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 CCHCR1Q8TD31 782 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 DPH5Q9H2P9 285 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 SEMA6BQ9H3T3 888 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 RNF14Q9UBS8 474 aa10.78□□□□□ -0.68
COL13A1-207ENST00000478219 SPDYE3A6NKU9 549 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.68
COL13A1-207ENST00000478219 CCNE1P24864 410 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 TNNC1P63316 161 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 CCDC178Q5BJE1 867 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 ANO7Q6IWH7 933 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 KCNH5Q8NCM2 988 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 RASGRP4Q8TDF6 673 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 LRRC45Q96CN5 670 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 TRIM31Q9BZY9 425 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 EPB41L4BQ9H329 900 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 MYH4Q9Y623 1939 aa10.77□□□□□ -0.68
COL13A1-207ENST00000478219 CFAP73A6NFT4 308 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 ASAP2O43150 1006 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 TTI1O43156 1089 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 BMP15O95972 392 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 CCND1P24385 295 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 ITIH4Q14624 930 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 SEC23AQ15436 765 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 TAF11Q15544 211 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 NAB2Q15742 525 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 VWA3BQ502W6 1294 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
COL13A1-207ENST00000478219 MAGEB6Q8N7X4 407 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 ANKS4BQ8N8V4 417 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 SCFD2Q8WU76 684 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 NAF1Q96HR8 494 aaKnown RBP10.77□□□□□ -0.69
COL13A1-207ENST00000478219 SYT15Q9BQS2 421 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 KRT23Q9C075 422 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 TMEM60Q9H2L4 133 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 ATP8A1Q9Y2Q0 1164 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.77□□□□□ -0.69
COL13A1-207ENST00000478219 TNKSO95271 1327 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.69
COL13A1-207ENST00000478219 SNAP23O00161 211 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 VIMP08670 466 aaKnown RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 PRPHP41219 470 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 SSR1P43307 286 aaKnown RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 ARID5AQ03989 594 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 PDE4DQ08499 809 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 CUL1Q13616 776 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 PDXDC1Q6P996 788 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 LCORLQ8N3X6 602 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 KIAA0895Q8NCT3 520 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 DHTKD1Q96HY7 919 aaPredicted RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 TSC22D3Q99576 134 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 BSDC1Q9NW68 430 aaPredicted RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 SWAP70Q9UH65 585 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 RPS6KL1Q9Y6S9 549 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 FAM205AQ6ZU69 1335 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms