RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 NOP56O00567 594 aaKnown RBP17.79■□□□□ 0.44
HMGA1-206ENST00000478214 F2P00734 622 aa17.79■□□□□ 0.44
HMGA1-206ENST00000478214 TIMP1P01033 207 aa17.79■□□□□ 0.44
HMGA1-206ENST00000478214 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
HMGA1-206ENST00000478214 MCTP2Q6DN12 878 aa17.79■□□□□ 0.44
HMGA1-206ENST00000478214 CRYGNQ8WXF5 182 aa17.79■□□□□ 0.44
HMGA1-206ENST00000478214 GPR20Q99678 358 aa17.79■□□□□ 0.44
HMGA1-206ENST00000478214 KCNH7Q9NS40 1196 aa17.79■□□□□ 0.44
HMGA1-206ENST00000478214 A0A1W2PPC1 479 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 HAS3O00219 553 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 MAFGO15525 162 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 ARP10275 920 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 CYP2C9P11712 490 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 ZNF76P36508 570 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
HMGA1-206ENST00000478214 MFSD10Q14728 455 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 KIAA0753Q2KHM9 967 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
HMGA1-206ENST00000478214 C16orf70Q9BSU1 422 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 ALG1Q9BT22 464 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
HMGA1-206ENST00000478214 LTBP2Q14767 1821 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 UMODL1Q5DID0 1318 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 FAM86B1E9PN63 330 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 MEIS1O00470 390 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 LGALS2P05162 132 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 CYP3A4P08684 503 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 FAM86B2P0C5J1 330 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 SUPT20HL2P0C7V6 817 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 CYP2C18P33260 490 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 NPY5RQ15761 445 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 MFSD5Q6N075 450 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 TDHQ8IZJ6 230 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 NOC4LQ9BVI4 516 aaKnown RBP17.77■□□□□ 0.44
HMGA1-206ENST00000478214 KATNAL1Q9BW62 490 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 HIPK3Q9H422 1215 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 ORC3Q9UBD5 711 aaPredicted RBP17.77■□□□□ 0.44
HMGA1-206ENST00000478214 PCDHA4Q9UN74 947 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 LAMA3Q16787 3333 aa17.77■□□□□ 0.44
HMGA1-206ENST00000478214 MYH7BA7E2Y1 1941 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 FDPSP14324 419 aaKnown RBP17.76■□□□□ 0.43
HMGA1-206ENST00000478214 EPHB4P54760 987 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 FPGSQ05932 587 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 UTP14CQ5TAP6 766 aaKnown RBP17.76■□□□□ 0.43
HMGA1-206ENST00000478214 GDF6Q6KF10 455 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-206ENST00000478214 SESTD1Q86VW0 696 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 PLA2G4DQ86XP0 818 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 TRIM50Q86XT4 487 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 BLIDQ8IZY5 108 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 C7orf31Q8N865 590 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 NSUN7Q8NE18 718 aaKnown RBP17.76■□□□□ 0.43
HMGA1-206ENST00000478214 AGO4Q9HCK5 861 aaKnown RBP17.76■□□□□ 0.43
HMGA1-206ENST00000478214 GJB4Q9NTQ9 266 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 HDAC6Q9UBN7 1215 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 LIMCH1Q9UPQ0 1083 aa17.76■□□□□ 0.43
HMGA1-206ENST00000478214 IGLV3-22A0A075B6J6 115 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 H3BRB1 525 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 EDIL3O43854 480 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 JAK2O60674 1132 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 FXR1P51114 621 aaKnown RBP eCLIP17.75■□□□□ 0.43
HMGA1-206ENST00000478214 ITGB3BPQ13352 177 aaPredicted RBP17.75■□□□□ 0.43
HMGA1-206ENST00000478214 C9orf50Q5SZB4 431 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 NIPA1Q7RTP0 329 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
HMGA1-206ENST00000478214 DAGLBQ8NCG7 672 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 UIMC1Q96RL1 719 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 TUT1Q9H6E5 874 aaKnown RBP17.75■□□□□ 0.43
HMGA1-206ENST00000478214 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
HMGA1-206ENST00000478214 GTF2IRD1Q9UHL9 959 aa17.75■□□□□ 0.43
HMGA1-206ENST00000478214 GSTTP1A0A1W2PQM5 241 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 M0R2N6 131 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 CSF2RAP15509 400 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 CCL23P55773 120 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 SHHQ15465 462 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 PTGISQ16647 500 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 SEPT1Q8WYJ6 367 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 SDF4Q9BRK5 362 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 PHF20Q9BVI0 1012 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 JPH1Q9HDC5 661 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-206ENST00000478214 NOD1Q9Y239 953 aa17.74■□□□□ 0.43
HMGA1-206ENST00000478214 NFASCO94856 1347 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 XBP1P17861 261 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 CIITAP33076 1130 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 TCF7P36402 384 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-206ENST00000478214 ZNF200P98182 395 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-206ENST00000478214 HIC1Q14526 733 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 RABEP1Q15276 862 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 CCDC83Q8IWF9 413 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 TMEM199Q8N511 208 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 TBCKQ8TEA7 893 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 WASF1Q92558 559 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 SLC9A2Q9UBY0 812 aa17.73■□□□□ 0.43
HMGA1-206ENST00000478214 DOCK5Q9H7D0 1870 aa17.72■□□□□ 0.43
HMGA1-206ENST00000478214 SOX1O00570 391 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-206ENST00000478214 PPIGQ13427 754 aaKnown RBP eCLIP17.72■□□□□ 0.43
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