RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TFAP4Q01664 338 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 TRIP12Q14669 1992 aaPredicted RBP8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 NAALADL2Q58DX5 795 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 TTBK2Q6IQ55 1244 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 BTNL9Q6UXG8 535 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 SEPT14Q6ZU15 432 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 RBM23Q86U06 439 aaKnown RBP8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 ADGRA3Q8IWK6 1321 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 KIAA2013Q8IYS2 634 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 VN1R2Q8NFZ6 395 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 RHPN1Q8TCX5 695 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 APBB2Q92870 758 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 HAUS7Q99871 368 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 S1PR5Q9H228 398 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 BOLA2Q9H3K6 86 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 B4DLN1 442 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 CAND2O75155 1236 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 PPFIA4O75335 1185 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 ZNF286BP0CG31 522 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 ARP10275 920 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 ATP5JP18859 108 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 SLC16A2P36021 539 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 MRPL12P52815 198 aaKnown RBP8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 MTMR3Q13615 1198 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 LAMC2Q13753 1193 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 DHX37Q8IY37 1157 aaKnown RBP8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 CLASRPQ8N2M8 674 aaKnown RBP8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 PPTC7Q8NI37 304 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 SEMA4AQ9H3S1 761 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 EPB41L4AQ9HCS5 686 aaPredicted RBP8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 IL17RBQ9NRM6 502 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 SORCS3Q9UPU3 1222 aa8.66□□□□□ -1.02
SPTLC1-205ENST00000477888 CHD6Q8TD26 2715 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 ENPP3O14638 875 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 PER2O15055 1255 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 DGKIO75912 1065 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 LMNAP02545 664 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 IFIT2P09913 472 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 NOVP48745 357 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 KCNC3Q14003 757 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 CEP85Q6P2H3 762 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 TMEM184AQ6ZMB5 413 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 CRIPAKQ8N1N5 446 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 KLHL23Q8NBE8 558 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 POF1BQ8WVV4 589 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 FRAT1Q92837 279 aaPredicted RBP8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 C16orf70Q9BSU1 422 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 SMOC2Q9H3U7 446 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 TLE6Q9H808 572 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 STX8Q9UNK0 236 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 SSUH2Q9Y2M2 353 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 MRPL42Q9Y6G3 142 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 FRYLO94915 3013 aa8.65□□□□□ -1.02
SPTLC1-205ENST00000477888 BAHCC1Q9P281 2608 aa8.65□□□□□ -1.03
SPTLC1-205ENST00000477888 C17orf102A2RUQ5 167 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 TREHO43280 583 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 ANP32CO43423 234 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 PI15O43692 258 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 NMT2O60551 498 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 CTSHP09668 335 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 GSE1Q14687 1217 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 ANGPT1Q15389 498 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 HSP90AB4PQ58FF6 505 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 FAM26DQ5JW98 314 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 SYDE2Q5VT97 1194 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 ZSCAN25Q6NSZ9 544 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 SYCE2Q6PIF2 218 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 DCAF4Q8WV16 495 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 OSBP2Q969R2 916 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 NEK1Q96PY6 1258 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 TAAR1Q96RJ0 339 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 RNPEPQ9H4A4 650 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 EHMT1Q9H9B1 1298 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 PNMA2Q9UL42 364 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 MICAL3Q7RTP6 2002 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 LCTP09848 1927 aa8.64□□□□□ -1.03
SPTLC1-205ENST00000477888 BAZ2AQ9UIF9 1905 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 EIF3JO75822 258 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 CHRNA1P02708 482 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 NPR3P17342 541 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 SP100P23497 879 aaPredicted RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 STXBP2Q15833 593 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 DUSP6Q16828 381 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 ST3GAL2Q16842 350 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 HSDL1Q3SXM5 330 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 CCDC105Q8IYK2 499 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 KCNG4Q8TDN1 519 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 NSUN6Q8TEA1 469 aaKnown RBP8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 TBC1D5Q92609 795 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 KIF1BPQ96EK5 621 aa8.63□□□□□ -1.03
SPTLC1-205ENST00000477888 IWS1Q96ST2 819 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms