RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SERINC5Q86VE9 423 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 KREMEN2Q8NCW0 462 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 CLEC4DQ8WXI8 215 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 STRBPQ96SI9 672 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 PLIN4Q96Q06 1357 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 MYH7P12883 1935 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 GIMAP6Q6P9H5 292 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 UBALD2Q8IYN6 164 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 CLASRPQ8N2M8 674 aaKnown RBP11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 SUSD6Q92537 303 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 PLVAPQ9BX97 442 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 MFSD1Q9H3U5 465 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 BAHCC1Q9P281 2608 aa11.43□□□□□ -0.58
SMARCB1-206ENST00000477836 PER2O15055 1255 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 BRD1O95696 1058 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 ITGB1P05556 798 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 TDO2P48775 406 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 TTBK2Q6IQ55 1244 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 ZSCAN25Q6NSZ9 544 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 SPPL3Q8TCT6 385 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 POF1BQ8WVV4 589 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 APBB2Q92870 758 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 ATP6V0A1Q93050 837 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 P2RX5Q93086 422 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 TLE6Q9H808 572 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 RC3H2Q9HBD1 1191 aaKnown RBP11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
SMARCB1-206ENST00000477836 C17orf102A2RUQ5 167 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 HAUS7Q99871 368 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 SMOC2Q9H3U7 446 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 EPB41L4AQ9HCS5 686 aaPredicted RBP11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 SORCS3Q9UPU3 1222 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 CHD6Q8TD26 2715 aa11.41□□□□□ -0.58
SMARCB1-206ENST00000477836 TPRP12270 2363 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 TREHO43280 583 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 APPP05067 770 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 CLCN5P51795 746 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 LAMC2Q13753 1193 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 ANGPT1Q15389 498 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 ST3GAL2Q16842 350 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 NAALADL2Q58DX5 795 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 HSP90AB4PQ58FF6 505 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 KLHL23Q8NBE8 558 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 EMID1Q96A84 441 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 ZNF689Q96CS4 500 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 NEK1Q96PY6 1258 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 APOL5Q9BWW9 433 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 DLL3Q9NYJ7 618 aa11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 DDX41Q9UJV9 622 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 MRPL42Q9Y6G3 142 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 EP300Q09472 2414 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-206ENST00000477836 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 SORBS3O60504 671 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 NMT2O60551 498 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 PPFIA3O75145 1194 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 ATP5JP18859 108 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 BTNL9Q6UXG8 535 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 FLCNQ8NFG4 579 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 VN1R2Q8NFZ6 395 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 MICAL1Q8TDZ2 1067 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 NR2E1Q9Y466 385 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 MRVI1Q9Y6F6 885 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 KIAA1671Q9BY89 1806 aa11.39□□□□□ -0.59
SMARCB1-206ENST00000477836 ACACBO00763 2458 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 CAND2O75155 1236 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 PPFIA4O75335 1185 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 DGKIO75912 1065 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 STXBP2Q15833 593 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 KIF1BPQ96EK5 621 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 TAAR1Q96RJ0 339 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 S1PR5Q9H228 398 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 PCDHB15Q9Y5E8 787 aa11.38□□□□□ -0.59
SMARCB1-206ENST00000477836 ENPP3O14638 875 aa11.37□□□□□ -0.59
SMARCB1-206ENST00000477836 GPAA1O43292 621 aa11.37□□□□□ -0.59
SMARCB1-206ENST00000477836 PI15O43692 258 aa11.37□□□□□ -0.59
SMARCB1-206ENST00000477836 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
SMARCB1-206ENST00000477836 ARP10275 920 aa11.37□□□□□ -0.59
SMARCB1-206ENST00000477836 GHRP10912 638 aa11.37□□□□□ -0.59
SMARCB1-206ENST00000477836 TECP42680 631 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms