RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 COPS5Q92905 334 aa14.91□□□□□ -0.02
TOP3A-205ENST00000477508 TNFRSF25Q93038 417 aa14.91□□□□□ -0.02
TOP3A-205ENST00000477508 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
TOP3A-205ENST00000477508 SDF4Q9BRK5 362 aa14.91□□□□□ -0.02
TOP3A-205ENST00000477508 SENP6Q9GZR1 1112 aaPredicted RBP14.91□□□□□ -0.02
TOP3A-205ENST00000477508 NFASCO94856 1347 aa14.91□□□□□ -0.02
TOP3A-205ENST00000477508 MYADML2A6NDP7 307 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 HSP90AA1P07900 732 aaKnown RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 PDIA4P13667 645 aaKnown RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 BEX3Q00994 111 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 INF2Q27J81 1249 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 Q4G0T1 1027 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 PRR16Q569H4 304 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 LARP1BQ659C4 914 aaKnown RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 PPP4R3AQ6IN85 833 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 CYFIP1Q7L576 1253 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 CYP2W1Q8TAV3 490 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 DIS3LQ8TF46 1054 aaKnown RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 MTG1Q9BT17 334 aaPredicted RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 AGO4Q9HCK5 861 aaKnown RBP14.9□□□□□ -0.02
TOP3A-205ENST00000477508 TBC1D22BQ9NU19 505 aa14.9□□□□□ -0.02
TOP3A-205ENST00000477508 A0A1W2PQ45 241 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-205ENST00000477508 A0A1W2PQY0 241 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 IPO5O00410 1097 aaKnown RBP14.89□□□□□ -0.03
TOP3A-205ENST00000477508 SLC34A2O95436 690 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 MMP3P08254 477 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 ARP10275 920 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 HOXD8P13378 290 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-205ENST00000477508 MLLT1Q03111 559 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-205ENST00000477508 LETM2Q2VYF4 491 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 C1orf53Q5VUE5 145 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 VTI1AQ96AJ9 217 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 MBOAT7Q96N66 472 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 ZNF577Q9BSK1 485 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 STARD7Q9NQZ5 370 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 TCEAL9Q9UHQ7 104 aa14.89□□□□□ -0.03
TOP3A-205ENST00000477508 ATP9AO75110 1047 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 MYL3P08590 195 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 U2AF2P26368 475 aaKnown RBP eCLIP14.88□□□□□ -0.03
TOP3A-205ENST00000477508 TRAPPC10P48553 1259 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 PURAQ00577 322 aaKnown RBP14.88□□□□□ -0.03
TOP3A-205ENST00000477508 HSDL1Q3SXM5 330 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 CXCL17Q6UXB2 119 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 SLC39A5Q6ZMH5 540 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 NOSTRINQ8IVI9 506 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 FERMT2Q96AC1 680 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 RIT2Q99578 217 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 KATNAL1Q9BW62 490 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 JPH1Q9HDC5 661 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-205ENST00000477508 SLC9A2Q9UBY0 812 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 DDX25Q9UHL0 483 aaKnown RBP14.88□□□□□ -0.03
TOP3A-205ENST00000477508 MKI67P46013 3256 aaKnown RBP14.88□□□□□ -0.03
TOP3A-205ENST00000477508 MROH7Q68CQ1 1323 aa14.88□□□□□ -0.03
TOP3A-205ENST00000477508 A0A0U1RQG5 324 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-205ENST00000477508 EDIL3O43854 480 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 CCNT1O60563 726 aaKnown RBP14.87□□□□□ -0.03
TOP3A-205ENST00000477508 PTGS1P23219 599 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 IRX5P78411 483 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-205ENST00000477508 ORC2Q13416 577 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-205ENST00000477508 BECN1Q14457 450 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 SNX17Q15036 470 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 SEPT1Q8WYJ6 367 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 LENG9Q96B70 501 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 FAM20AQ96MK3 541 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 GPR20Q99678 358 aa14.87□□□□□ -0.03
TOP3A-205ENST00000477508 NOL7Q9UMY1 257 aaKnown RBP14.87□□□□□ -0.03
TOP3A-205ENST00000477508 TBX3O15119 743 aa14.86□□□□□ -0.03
TOP3A-205ENST00000477508 TDP2O95551 362 aa14.86□□□□□ -0.03
TOP3A-205ENST00000477508 KRT76Q01546 638 aa14.86□□□□□ -0.03
TOP3A-205ENST00000477508 ITGB3BPQ13352 177 aaPredicted RBP14.86□□□□□ -0.03
TOP3A-205ENST00000477508 EARS2Q5JPH6 523 aaKnown RBP14.86□□□□□ -0.03
TOP3A-205ENST00000477508 MCTP1Q6DN14 999 aa14.86□□□□□ -0.03
TOP3A-205ENST00000477508 SLC5A5Q92911 643 aa14.86□□□□□ -0.03
TOP3A-205ENST00000477508 PKD2L1Q9P0L9 805 aa14.86□□□□□ -0.03
TOP3A-205ENST00000477508 ARVCFO00192 962 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 MSH4O15457 936 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 DHX15O43143 795 aaKnown RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 MARCH6O60337 910 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 GAS7O60861 476 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 BAG4O95429 457 aaKnown RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 F2P00734 622 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 ATN1P54259 1190 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 PTPN11Q06124 597 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 ITGA7Q13683 1181 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 LRCH2Q5VUJ6 765 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 ZNF746Q6NUN9 644 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 SMAP1Q8IYB5 467 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 SLFN12Q8IYM2 578 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 SLC43A3Q8NBI5 491 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 DPF3Q92784 378 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 BCAS3Q9H6U6 928 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 ZNF215Q9UL58 517 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-205ENST00000477508 NR2E3Q9Y5X4 410 aa14.85□□□□□ -0.03
TOP3A-205ENST00000477508 FAM205CA6NFA0 338 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 EVI5O60447 810 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 SORBS3O60504 671 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 ATG7O95352 703 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 TCF7P36402 384 aaPredicted RBP14.84□□□□□ -0.03
TOP3A-205ENST00000477508 CDK7P50613 346 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms