RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 FAM83BQ5T0W9 1011 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 XRRA1Q6P2D8 792 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.47□□□□□ -1.21
LDB3-206ENST00000477489 SV2BQ7L1I2 683 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 KRT26Q7Z3Y9 468 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 SULF1Q8IWU6 871 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 SCUBE3Q8IX30 993 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 ANKLE1Q8NAG6 615 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 GIMAP8Q8ND71 665 aaPredicted RBP7.47□□□□□ -1.21
LDB3-206ENST00000477489 ACER1Q8TDN7 264 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 FEZ1Q99689 392 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TRIM9Q9C026 710 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TTC12Q9H892 705 aaPredicted RBP7.47□□□□□ -1.21
LDB3-206ENST00000477489 PICK1Q9NRD5 415 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 KCND1Q9NSA2 647 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TMEM260Q9NX78 707 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.47□□□□□ -1.21
LDB3-206ENST00000477489 PHIPQ8WWQ0 1821 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 SYNRGQ9UMZ2 1314 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 LRRC10BA6NIK2 292 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 UNCXA6NJT0 531 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ATP2A1O14983 1001 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 CCP110O43303 1012 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 SLC37A4O43826 429 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 EDIL3O43854 480 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 RAD21O60216 631 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 TDP2O95551 362 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 FGFR1OPO95684 399 aaKnown RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 SERPINC1P01008 464 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 BCRP11274 1271 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 PLCG1P19174 1290 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 LMOD1P29536 600 aaPredicted RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 TXKP42681 527 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 HSD17B4P51659 736 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 BACE1P56817 501 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 UBASH3AP57075 661 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 UBE2SQ16763 222 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 UNC13DQ70J99 1090 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 FAM114A1Q8IWE2 563 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ADSSL1Q8N142 457 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ZNF280CQ8ND82 737 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ETNPPLQ8TBG4 499 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 NEK9Q8TD19 979 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 SNX29Q8TEQ0 813 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 LARP4BQ92615 738 aaKnown RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 RAD54LQ92698 747 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 HAS1Q92839 578 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ERCC4Q92889 916 aaPredicted RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 IQCDQ96DY2 449 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 MMTAG2Q9BU76 263 aaKnown RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 WDR11Q9BZH6 1224 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 HSD3B7Q9H2F3 369 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 SLC38A10Q9HBR0 1119 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ADARB2Q9NS39 739 aaKnown RBP7.46□□□□□ -1.22
LDB3-206ENST00000477489 SPTLC3Q9NUV7 552 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 RNF181Q9P0P0 153 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 PPP1R9AQ9ULJ8 1098 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 NFE2L3Q9Y4A8 694 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 GJA3Q9Y6H8 435 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 ZNF541Q9H0D2 1346 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 LOC285556D6RIA3 1793 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 PAPPA2Q9BXP8 1791 aa7.46□□□□□ -1.22
LDB3-206ENST00000477489 SCN4AP35499 1836 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 A0A1B0GTH6 734 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L15C9J2P7 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L13C9JLJ4 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L11C9JVI0 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L18D6R9N7 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L22D6RA61 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L17D6RBQ6 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L19D6RCP7 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L20D6RJB6 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 OPLAHO14841 1288 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 KLRC4O43908 158 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 ZBED4O75132 1171 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 CDK11BP21127 795 aaKnown RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 EEF1GP26641 437 aaKnown RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 RPA1P27694 616 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 GCGRP47871 477 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 RASSF7Q02833 373 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 GRB10Q13322 594 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 SHROOM1Q2M3G4 852 aaPredicted RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 SH3D19Q5HYK7 790 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 MORN1Q5T089 497 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 USP17L6PQ6QN14 398 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 MIGA2Q7L4E1 593 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 CCDC186Q7Z3E2 898 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 LDHDQ86WU2 507 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 VSTM4Q8IW00 320 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 KIAA1524Q8TCG1 905 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 EMID1Q96A84 441 aaPredicted RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 NUP88Q99567 741 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms