RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 METP08581 1390 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 SOS2Q07890 1332 aaPredicted RBP20.11■□□□□ 0.81
VARS2-209ENST00000477288 ENC1O14682 589 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 GSPT1P15170 499 aaKnown RBP20.11■□□□□ 0.81
VARS2-209ENST00000477288 EPHB1P54762 984 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 PDCD2Q16342 344 aaPredicted RBP20.11■□□□□ 0.81
VARS2-209ENST00000477288 OR6B2Q6IFH4 312 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 MYO1EQ12965 1108 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 DALRD3Q5D0E6 543 aaKnown RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 CYP4F22Q6NT55 531 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.1■□□□□ 0.811e-7■■■■■ 35.3
VARS2-209ENST00000477288 ZBED2Q9BTP6 218 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 INTS9Q9NV88 658 aaKnown RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 EPN1Q9Y6I3 576 aaPredicted RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 GOLGA8QA0A0J9YX86 632 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 GOLGA8OA6NCC3 632 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 EIF3CLB5ME19 914 aaKnown RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 GOLGA8NF8WBI6 632 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 MYL3P08590 195 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 ZKSCAN8Q15776 578 aaPredicted RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 ZBTB41Q5SVQ8 909 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 SCYL3Q8IZE3 742 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 BANK1Q8NDB2 785 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 SLC10A4Q96EP9 437 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 CFAP36Q96G28 342 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 EIF3CQ99613 913 aaKnown RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 SLC8A2Q9UPR5 921 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 ERBB4Q15303 1308 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 MED7O43513 233 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 CD58P19256 250 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 DARS2Q6PI48 645 aaKnown RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 ARHGEF18Q6ZSZ5 1173 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 TMC4Q7Z404 712 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 EPS15L1Q9UBC2 864 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 KDM5AP29375 1690 aaKnown RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 EVI5O60447 810 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 CDHR1Q96JP9 859 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 BBOX1O75936 387 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 KRT33BQ14525 404 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 SCARA5Q6ZMJ2 495 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 RNF139Q8WU17 664 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 ANLNQ9NQW6 1124 aa20.1■□□□□ 0.81
VARS2-209ENST00000477288 SUCLA2Q9P2R7 463 aaPredicted RBP20.1■□□□□ 0.81
VARS2-209ENST00000477288 EFCAB8A8MWE9 144 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 FMNL1O95466 1100 aaPredicted RBP20.09■□□□□ 0.81
VARS2-209ENST00000477288 MSH2P43246 934 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 BASP1P80723 227 aaKnown RBP20.09■□□□□ 0.81
VARS2-209ENST00000477288 RUNDC3BQ96NL0 473 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 MCF2LO15068 1137 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 SOX5P35711 763 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 KCTD6Q8NC69 237 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 SERPINB13Q9UIV8 391 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 POLIQ9UNA4 740 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 MAGI2Q86UL8 1455 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 TOM1L1O75674 476 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 SUN1O94901 812 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 PSAPP07602 524 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 TCP11X2Q5H9J9 407 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 MTMR6Q9Y217 621 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 CIAO1O76071 339 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 SRGAP2CP0DJJ0 459 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 CCDC138Q96M89 665 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 STK17AQ9UEE5 414 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 CASP14P31944 242 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 GOLGA8FQ08AF8 430 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 GOLGA8DPQ0D2H9 430 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 SGO2Q562F6 1265 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 DSTYKQ6XUX3 929 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 LCA5Q86VQ0 697 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 SLITRK6Q9H5Y7 841 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 TLK1Q9UKI8 766 aa20.09■□□□□ 0.81
VARS2-209ENST00000477288 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 SPOPLQ6IQ16 392 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 DNAJC24Q6P3W2 148 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 HEXIM2Q96MH2 286 aaKnown RBP20.08■□□□□ 0.81
VARS2-209ENST00000477288 TMEM206Q9H813 350 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 SSH2Q76I76 1423 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 ARHGEF37A1IGU5 675 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 PEX19P40855 299 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 SNAP25P60880 206 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 NOP14P78316 857 aaKnown RBP20.08■□□□□ 0.81
VARS2-209ENST00000477288 CUEDC2Q9H467 287 aa20.08■□□□□ 0.81
VARS2-209ENST00000477288 TRPA1O75762 1119 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 SNCBQ16143 134 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 TLR7Q9NYK1 1049 aaKnown RBP20.08■□□□□ 0.8
VARS2-209ENST00000477288 INPP5FQ9Y2H2 1132 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 PLEKHG1Q9ULL1 1385 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 DDIT3P35638 169 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 PROSER3Q2NL68 480 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 CALN1Q9BXU9 219 aa20.08■□□□□ 0.8
VARS2-209ENST00000477288 HNRNPCL2B2RXH8 293 aa20.07■□□□□ 0.8
VARS2-209ENST00000477288 HNRNPCL1O60812 293 aaKnown RBP20.07■□□□□ 0.8
VARS2-209ENST00000477288 LRRC8AQ8IWT6 810 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms