RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 FAM47CQ5HY64 1035 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 CYP2W1Q8TAV3 490 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 WASF1Q92558 559 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 GPR20Q99678 358 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 C16orf70Q9BSU1 422 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 PCDHA4Q9UN74 947 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 LIMCH1Q9UPQ0 1083 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 KIAA1217Q5T5P2 1943 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 CTDNEP1O95476 244 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 PSEN2P49810 448 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 KIAA0753Q2KHM9 967 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 TDHQ8IZJ6 230 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 C7orf31Q8N865 590 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
ACTN4-205ENST00000477174 TRMT13Q9NUP7 481 aaKnown RBP15.31■□□□□ 0.04
ACTN4-205ENST00000477174 H3BRB1 525 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 NFASCO94856 1347 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 ZNF286BP0CG31 522 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 ARP10275 920 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 CIITAP33076 1130 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 USP11P51784 963 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 FPGSQ05932 587 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 MFSD10Q14728 455 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 TMEM199Q8N511 208 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 DAGLBQ8NCG7 672 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 SEPT1Q8WYJ6 367 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 ZSCAN31Q96LW9 406 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-205ENST00000477174 AIFM3Q96NN9 605 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 SDF4Q9BRK5 362 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 NOC4LQ9BVI4 516 aaKnown RBP15.3■□□□□ 0.04
ACTN4-205ENST00000477174 HIPK3Q9H422 1215 aa15.3■□□□□ 0.04
ACTN4-205ENST00000477174 TUT1Q9H6E5 874 aaKnown RBP15.3■□□□□ 0.04
ACTN4-205ENST00000477174 AGO4Q9HCK5 861 aaKnown RBP15.3■□□□□ 0.04
ACTN4-205ENST00000477174 ORC3Q9UBD5 711 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-205ENST00000477174 FAM86B1E9PN63 330 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 M0R2N6 131 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 LARGE1O95461 756 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 LGALS2P05162 132 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 FAM86B2P0C5J1 330 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 RABEP1Q15276 862 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 PTGISQ16647 500 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 PLA2G4DQ86XP0 818 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 BLIDQ8IZY5 108 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 RASGRP4Q8TDF6 673 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 JPH1Q9HDC5 661 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-205ENST00000477174 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 SCN10AQ9Y5Y9 1956 aa15.29■□□□□ 0.04
ACTN4-205ENST00000477174 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 GSTTP1A0A1W2PQM5 241 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 CYP2C9P11712 490 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 FDPSP14324 419 aaKnown RBP15.28■□□□□ 0.04
ACTN4-205ENST00000477174 CYP2C18P33260 490 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 SETQ01105 290 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-205ENST00000477174 PPIGQ13427 754 aaKnown RBP eCLIP15.28■□□□□ 0.04
ACTN4-205ENST00000477174 NPY5RQ15761 445 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 LRIT3Q3SXY7 679 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 PHF20Q9BVI0 1012 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 PPP1R12CQ9BZL4 782 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 SH2B1Q9NRF2 756 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-205ENST00000477174 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 SLC9A2Q9UBY0 812 aa15.28■□□□□ 0.04
ACTN4-205ENST00000477174 ZNF215Q9UL58 517 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-205ENST00000477174 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 TCF7P36402 384 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-205ENST00000477174 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
ACTN4-205ENST00000477174 SP4Q02446 784 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 BFSP2Q13515 415 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 GDF6Q6KF10 455 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-205ENST00000477174 RETREG2Q8NC44 543 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 NSUN7Q8NE18 718 aaKnown RBP15.27■□□□□ 0.04
ACTN4-205ENST00000477174 PPP1R13LQ8WUF5 828 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 LLPHQ9BRT6 129 aaKnown RBP15.27■□□□□ 0.04
ACTN4-205ENST00000477174 TBC1D22BQ9NU19 505 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.04
ACTN4-205ENST00000477174 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
ACTN4-205ENST00000477174 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
ACTN4-205ENST00000477174 GNAT1P11488 350 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 CSF2RAP15509 400 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 EPHB4P54760 987 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
ACTN4-205ENST00000477174 SHHQ15465 462 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 PRR16Q569H4 304 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
ACTN4-205ENST00000477174 KRT25Q7Z3Z0 450 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 RPUSD2Q8IZ73 545 aaKnown RBP15.26■□□□□ 0.03
ACTN4-205ENST00000477174 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 TBCKQ8TEA7 893 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 CTAGE1Q96RT6 745 aa15.26■□□□□ 0.03
ACTN4-205ENST00000477174 ZNF577Q9BSK1 485 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms