RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 RPA1P27694 616 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
CCDC30-209ENST00000477155 KIAA0895Q8NCT3 520 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 DYDC2Q96IM9 177 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 TRIM47Q96LD4 638 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 C12orf42Q96LP6 360 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 BHMT2Q9H2M3 363 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 DOCK1Q14185 1865 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 TRAF5O00463 557 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 ERCC3P19447 782 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 CNNM4Q6P4Q7 775 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 UNC13DQ70J99 1090 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
CCDC30-209ENST00000477155 DNAJC19Q96DA6 116 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 L3MBTL3Q96JM7 780 aaPredicted RBP7.4□□□□□ -1.22
CCDC30-209ENST00000477155 PAGR1Q9BTK6 254 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 PANK4Q9NVE7 773 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
CCDC30-209ENST00000477155 PCNTO95613 3336 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 SORBS3O60504 671 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 SLITRK3O94933 977 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 CYP11B2P19099 503 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 PGM5Q15124 567 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 HERC4Q5GLZ8 1057 aaPredicted RBP7.4□□□□□ -1.23
CCDC30-209ENST00000477155 CT47A1Q5JQC4 288 aaPredicted RBP7.4□□□□□ -1.23
CCDC30-209ENST00000477155 HYIQ5T013 277 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 ANKRD40Q6AI12 368 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 REPS2Q8NFH8 660 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 CPLX3Q8WVH0 158 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 SLC5A5Q92911 643 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 TEX13BQ9BXU2 312 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 UNC45AQ9H3U1 944 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 TAB2Q9NYJ8 693 aa7.4□□□□□ -1.23
CCDC30-209ENST00000477155 SFI1A8K8P3 1242 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 FDX1P10109 184 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SKILP12757 684 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 MKRN3Q13064 507 aaKnown RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 MTMR1Q13613 665 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 NOLC1Q14978 699 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ARSHQ5FYA8 562 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 CDKAL1Q5VV42 579 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 CSGALNACT2Q8N6G5 542 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 BCAS3Q9H6U6 928 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 PXMP2Q9NR77 195 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 PVALEFA0A1B0GWK0 134 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 KCNJ18B7U540 433 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 N4BP3O15049 544 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ZNF500O60304 480 aaPredicted RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 GRIN3BO60391 1043 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ATP9AO75110 1047 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SLC12A3P55017 1021 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 COASYQ13057 564 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 KCNJ12Q14500 433 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 KRT31Q15323 416 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 DNTTIP2Q5QJE6 756 aaKnown RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ARMCX5Q6P1M9 558 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ERO1BQ86YB8 467 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 VSTM4Q8IW00 320 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 P2RX5Q93086 422 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 HSD17B14Q9BPX1 270 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SH2D3AQ9BRG2 576 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 PDCD2LQ9BRP1 358 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 TEKT3Q9BXF9 490 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 FGFBP2Q9BYJ0 223 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 LRRC27Q9C0I9 530 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 ADAMTS5Q9UNA0 930 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SFPQP23246 707 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 IRX3P78415 501 aaPredicted RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SP4Q02446 784 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 NR1I3Q14994 352 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SH3D19Q5HYK7 790 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 APTXQ7Z2E3 356 aaKnown RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 IRF2BP1Q8IU81 584 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 NELFCDQ8IXH7 590 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 KIAA1524Q8TCG1 905 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 OPTNQ96CV9 577 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 DHTKD1Q96HY7 919 aaPredicted RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 SEMA6BQ9H3T3 888 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 A1CFQ9NQ94 594 aaKnown RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 WRAP73Q9P2S5 460 aaPredicted RBP7.39□□□□□ -1.23
CCDC30-209ENST00000477155 RABGAP1Q9Y3P9 1069 aa7.39□□□□□ -1.23
CCDC30-209ENST00000477155 IQCA1LA6NCM1 817 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 RSPH10B2B2RC85 870 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 NR3C2P08235 984 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 RSPH10BP0C881 870 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 CCNE1P24864 410 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 ADKP55263 362 aaKnown RBP7.38□□□□□ -1.23
CCDC30-209ENST00000477155 SETQ01105 290 aaPredicted RBP7.38□□□□□ -1.23
CCDC30-209ENST00000477155 PPATQ06203 517 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 ITGB3BPQ13352 177 aaPredicted RBP7.38□□□□□ -1.23
CCDC30-209ENST00000477155 FILIP1LQ4L180 1135 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 TCP11X2Q5H9J9 407 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 TTI2Q6NXR4 508 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 ANKRD35Q8N283 1001 aa7.38□□□□□ -1.23
CCDC30-209ENST00000477155 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms