RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 NKD2Q969F2 451 aaPredicted RBP18.08■□□□□ 0.48
SMG5-204ENST00000476954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMG5-204ENST00000476954 CEP250Q9BV73 2442 aa18.08■□□□□ 0.48
SMG5-204ENST00000476954 TSPY2A6NKD2 308 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 B4DLN1 442 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 PATL2C9JE40 543 aaKnown RBP18.07■□□□□ 0.48
SMG5-204ENST00000476954 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
SMG5-204ENST00000476954 TREHO43280 583 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
SMG5-204ENST00000476954 CTDSPL2Q05D32 466 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 USH1GQ495M9 461 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
SMG5-204ENST00000476954 ATP6V0A1Q93050 837 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 SEC62Q99442 399 aaKnown RBP18.07■□□□□ 0.48
SMG5-204ENST00000476954 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
SMG5-204ENST00000476954 ACACBO00763 2458 aa18.06■□□□□ 0.48
SMG5-204ENST00000476954 ITGB1P05556 798 aa18.06■□□□□ 0.48
SMG5-204ENST00000476954 SP100P23497 879 aaPredicted RBP18.06■□□□□ 0.48
SMG5-204ENST00000476954 NUBP1P53384 320 aa18.06■□□□□ 0.48
SMG5-204ENST00000476954 KBTBD3Q8NAB2 608 aa18.06■□□□□ 0.48
SMG5-204ENST00000476954 PPTC7Q8NI37 304 aa18.06■□□□□ 0.48
SMG5-204ENST00000476954 EMID1Q96A84 441 aaPredicted RBP18.06■□□□□ 0.48
SMG5-204ENST00000476954 RMDN1Q96DB5 314 aa18.06■□□□□ 0.48
SMG5-204ENST00000476954 TTC3P53804 2025 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 C17orf102A2RUQ5 167 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 HOXD8P13378 290 aaPredicted RBP18.05■□□□□ 0.48
SMG5-204ENST00000476954 GNAT2P19087 354 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 LAMC2Q13753 1193 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 BTG3Q14201 252 aaPredicted RBP18.05■□□□□ 0.48
SMG5-204ENST00000476954 SPPL3Q8TCT6 385 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 SYTL5Q8TDW5 730 aaPredicted RBP18.05■□□□□ 0.48
SMG5-204ENST00000476954 SMOC2Q9H3U7 446 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 RWDD3Q9Y3V2 267 aa18.05■□□□□ 0.48
SMG5-204ENST00000476954 WDR19Q8NEZ3 1342 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 SLC3A2P08195 630 aaKnown RBP18.04■□□□□ 0.48
SMG5-204ENST00000476954 ARP10275 920 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 NOVP48745 357 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 STXBP2Q15833 593 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 HSDL1Q3SXM5 330 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 ZBTB33Q86T24 672 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 PANK1Q8TE04 598 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 SUSD6Q92537 303 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 C16orf70Q9BSU1 422 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 MRPL42Q9Y6G3 142 aaKnown RBP18.04■□□□□ 0.48
SMG5-204ENST00000476954 DMXL1Q9Y485 3027 aa18.04■□□□□ 0.48
SMG5-204ENST00000476954 SPTBN2O15020 2390 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 PER2O15055 1255 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
SMG5-204ENST00000476954 RANBP6O60518 1105 aaKnown RBP18.03■□□□□ 0.48
SMG5-204ENST00000476954 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 SMIM10L2AP0DMW4 78 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 SMIM10L2BP0DMW5 78 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
SMG5-204ENST00000476954 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 ZNF689Q96CS4 500 aaPredicted RBP18.03■□□□□ 0.48
SMG5-204ENST00000476954 CNTNAP3BQ96NU0 1288 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 TMEM47Q9BQJ4 181 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 CNTNAP3Q9BZ76 1288 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 NAPBQ9H115 298 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 RNPEPQ9H4A4 650 aa18.03■□□□□ 0.48
SMG5-204ENST00000476954 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
SMG5-204ENST00000476954 PPFIA4O75335 1185 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 ATF7P17544 494 aaPredicted RBP18.02■□□□□ 0.48
SMG5-204ENST00000476954 HOXC8P31273 242 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 TSHZ3Q63HK5 1081 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 KLHL23Q8NBE8 558 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.48
SMG5-204ENST00000476954 POF1BQ8WVV4 589 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 APBB2Q92870 758 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 PPP2R3CQ969Q6 453 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 RMDN3Q96TC7 470 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 PLVAPQ9BX97 442 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 NACAP1Q9BZK3 213 aa18.02■□□□□ 0.48
SMG5-204ENST00000476954 PDHBP11177 359 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 DGLUCYQ7Z3D6 616 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 KREMEN2Q8NCW0 462 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 RGS22Q8NE09 1264 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 P2RX5Q93086 422 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 APOL5Q9BWW9 433 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 CDH22Q9UJ99 828 aa18.01■□□□□ 0.47
SMG5-204ENST00000476954 ENPP3O14638 875 aa18■□□□□ 0.47
SMG5-204ENST00000476954 FOXP2O15409 715 aa18■□□□□ 0.47
SMG5-204ENST00000476954 BRD1O95696 1058 aa18■□□□□ 0.47
SMG5-204ENST00000476954 GGPS1O95749 300 aa18■□□□□ 0.47
SMG5-204ENST00000476954 GHRP10912 638 aa18■□□□□ 0.47
SMG5-204ENST00000476954 SP2Q02086 613 aa18■□□□□ 0.47
SMG5-204ENST00000476954 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
SMG5-204ENST00000476954 IWS1Q96ST2 819 aa18■□□□□ 0.47
SMG5-204ENST00000476954 BCAS3Q9H6U6 928 aa18■□□□□ 0.47
SMG5-204ENST00000476954 TLE6Q9H808 572 aa18■□□□□ 0.47
SMG5-204ENST00000476954 SETD4Q9NVD3 440 aa18■□□□□ 0.47
SMG5-204ENST00000476954 DOCK5Q9H7D0 1870 aa18■□□□□ 0.47
SMG5-204ENST00000476954 MYH6P13533 1939 aa18■□□□□ 0.47
SMG5-204ENST00000476954 PPFIA3O75145 1194 aa17.99■□□□□ 0.47
SMG5-204ENST00000476954 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms