RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 IDEP14735 1019 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 ECE1P42892 770 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 SLC1A4P43007 532 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 AMPD2Q01433 879 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 KLRC3Q07444 240 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 KIAA1328Q86T90 577 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 EPC1Q9H2F5 836 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 NDST4Q9H3R1 872 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 NHEJ1Q9H9Q4 299 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-208ENST00000476724 PUF60Q9UHX1 559 aaKnown RBP18.26■□□□□ 0.51
TMEM53-208ENST00000476724 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 CYP3A7P24462 503 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 HERVK_113P62684 666 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 AP3B2Q13367 1082 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 TERF2Q15554 542 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 CCDC122Q5T0U0 273 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 HPS3Q969F9 1004 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 RAB21Q9UL25 225 aa18.26■□□□□ 0.51
TMEM53-208ENST00000476724 TBC1D12O60347 775 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 KIF20AO95235 890 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 NDUFB10O96000 172 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 QRICH1Q2TAL8 776 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 MYOCDQ8IZQ8 938 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 TEPSINQ96N21 525 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 EDEM3Q9BZQ6 932 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 TSGA10Q9BZW7 698 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 ZBTB21Q9ULJ3 1066 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 PLAGL2Q9UPG8 496 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 ATAD5Q96QE3 1844 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
TMEM53-208ENST00000476724 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 KCNK18Q7Z418 384 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 SLFN12Q8IYM2 578 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 JAKMIP2Q96AA8 810 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 DNAJC19Q96DA6 116 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 EEF2KMTQ96G04 330 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 MBOAT7Q96N66 472 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 HACL1Q9UJ83 578 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 PRDM4Q9UKN5 801 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 SIK3Q9Y2K2 1263 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 ERLIN1O75477 346 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 TRAPPC11Q7Z392 1133 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 ZSWIM4Q9H7M6 989 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 ANKZF1Q9H8Y5 726 aa18.24■□□□□ 0.51
TMEM53-208ENST00000476724 SEC31AO94979 1220 aaKnown RBP18.23■□□□□ 0.51
TMEM53-208ENST00000476724 KLK7P49862 253 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
TMEM53-208ENST00000476724 COASYQ13057 564 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 SPA17Q15506 151 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 PAPD7Q5XG87 772 aaKnown RBP18.23■□□□□ 0.51
TMEM53-208ENST00000476724 LRRC55Q6ZSA7 311 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 CCDC65Q8IXS2 484 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 SPICE1Q8N0Z3 855 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 CCDC42Q96M95 316 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 ANO3Q9BYT9 981 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 KCNMB3Q9NPA1 279 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 PANK4Q9NVE7 773 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
TMEM53-208ENST00000476724 ANO9A1A5B4 782 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 TBX3O15119 743 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 CAP2P40123 477 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 MMP14P50281 582 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 MAP3K10Q02779 954 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
TMEM53-208ENST00000476724 ECM1Q16610 540 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 LMNB1P20700 586 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 VAV2P52735 878 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 SNAP25P60880 206 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 KIF5AQ12840 1032 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 FAM26FQ5R3K3 315 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 GMCL1Q96IK5 515 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 RPGRIP1Q96KN7 1286 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 CEP63Q96MT8 703 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 AMNQ9BXJ7 453 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 FUT8Q9BYC5 575 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 UBXN6Q9BZV1 441 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 GBP3Q9H0R5 595 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 SAR1BQ9Y6B6 198 aa18.22■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L15C9J2P7 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L13C9JLJ4 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L11C9JVI0 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L18D6R9N7 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L22D6RA61 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L17D6RBQ6 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L19D6RCP7 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L20D6RJB6 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USO1O60763 962 aaKnown RBP18.21■□□□□ 0.51
TMEM53-208ENST00000476724 GNA14O95837 355 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 FOSP01100 380 aaPredicted RBP18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L24Q0WX57 530 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 LONRF2Q1L5Z9 754 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 ZCWPW2Q504Y3 356 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 HAUS3Q68CZ6 603 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.51
TMEM53-208ENST00000476724 TRPM4Q8TD43 1214 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms