RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CDIP1Q9H305 208 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 PARD6AQ9NPB6 346 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 MAGEC2Q9UBF1 373 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-211ENST00000476215 NUDT5Q9UKK9 219 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTCD3-211ENST00000476215 TNPO3Q9Y5L0 923 aaKnown RBP7.13□□□□□ -1.27
PTCD3-211ENST00000476215 SBNO2Q9Y2G9 1366 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 DGKIO75912 1065 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 NCAM1P13591 858 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 IGFALSP35858 605 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 SLC6A11P48066 632 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 VWA3BQ502W6 1294 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 B3GNT8Q7Z7M8 397 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 TP53I13Q8NBR0 393 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-211ENST00000476215 PCDH19Q8TAB3 1148 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 RXFP1Q9HBX9 757 aa7.12□□□□□ -1.27
PTCD3-211ENST00000476215 INTS7Q9NVH2 962 aaKnown RBP7.12□□□□□ -1.27
PTCD3-211ENST00000476215 ASLP04424 464 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 CANXP27824 592 aaKnown RBP7.11□□□□□ -1.27
PTCD3-211ENST00000476215 ST5P78524 1137 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 ZNF460Q14592 562 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 CNNM4Q6P4Q7 775 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 ZNF662Q6ZS27 426 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 FBXW5Q969U6 566 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 EPB41L1Q9H4G0 881 aa7.11□□□□□ -1.27
PTCD3-211ENST00000476215 LUC7LQ9NQ29 371 aaKnown RBP7.11□□□□□ -1.27
PTCD3-211ENST00000476215 DBR1Q9UK59 544 aaKnown RBP7.11□□□□□ -1.27
PTCD3-211ENST00000476215 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
PTCD3-211ENST00000476215 PYGMP11217 842 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 GNAT1P11488 350 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 HOXA5P20719 270 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 PMLP29590 882 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 DNM2P50570 870 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 FOXO4P98177 505 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 FAM47CQ5HY64 1035 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 LRRTM3Q86VH5 581 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
PTCD3-211ENST00000476215 FNIP1Q8TF40 1166 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 ALG3Q92685 438 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 PWWP2AQ96N64 755 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 CATSPERZQ9NTU4 200 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 COQ6Q9Y2Z9 468 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 SIT1Q9Y3P8 196 aa7.1□□□□□ -1.27
PTCD3-211ENST00000476215 CCDC66A2RUB6 948 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 SH3D21A4FU49 640 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 B4E1Z4 1266 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 FFAR3O14843 346 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 GSTA4O15217 222 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 JMJD7P0C870 316 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 COL6A2P12110 1019 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 MYCLP1P12525 358 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-211ENST00000476215 FLT3P36888 993 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 LIMS1P48059 325 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 DLX2Q07687 328 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-211ENST00000476215 CACNB2Q08289 660 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-211ENST00000476215 SPIRE1Q08AE8 756 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 LILRA6Q6PI73 481 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 SAPCD2Q86UD0 394 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 MIB1Q86YT6 1006 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 C20orf173Q96LM9 149 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 AP5M1Q9H0R1 490 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 XYLT2Q9H1B5 865 aa7.09□□□□□ -1.27
PTCD3-211ENST00000476215 WNT9AO14904 365 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 KCNA6P17658 529 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 NEK4P51957 841 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-211ENST00000476215 STEAP3Q658P3 488 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 ZCCHC8Q6NZY4 707 aaKnown RBP7.08□□□□□ -1.28
PTCD3-211ENST00000476215 ABHD17CQ6PCB6 329 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 UBE2R2Q712K3 238 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-211ENST00000476215 OTOP3Q7RTS5 596 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 DDX53Q86TM3 631 aaKnown RBP7.08□□□□□ -1.28
PTCD3-211ENST00000476215 SP8Q8IXZ3 490 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 IGSF22Q8N9C0 903 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 PIP4K2CQ8TBX8 421 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTCD3-211ENST00000476215 SEC14L1Q92503 715 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 TARS2Q9BW92 718 aaKnown RBP7.08□□□□□ -1.28
PTCD3-211ENST00000476215 RTEL1Q9NZ71 1219 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 SAMD15Q9P1V8 674 aa7.08□□□□□ -1.28
PTCD3-211ENST00000476215 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-211ENST00000476215 KRIT1O00522 736 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 PDE8AO60658 829 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 CKMP06732 381 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 BMP7P18075 431 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 MASP1P48740 699 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 CHRNA2Q15822 529 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 CRY1Q16526 586 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 CFAP100Q494V2 611 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 PIK3R6Q5UE93 754 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 C16orf59Q7L2K0 433 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 CISD2Q8N5K1 135 aaKnown RBP7.07□□□□□ -1.28
PTCD3-211ENST00000476215 SLC6A20Q9NP91 592 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 CBLCQ9ULV8 474 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 PRKAB1Q9Y478 270 aa7.07□□□□□ -1.28
PTCD3-211ENST00000476215 A0A087X0B3 334 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 HGSO14964 777 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-211ENST00000476215 NKRFO15226 690 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTCD3-211ENST00000476215 SGSM2O43147 1006 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms