RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	PARP1	P09874	1014 aa	Known RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KCNJ6	P48051	423 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ASPH	Q12797	758 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	C16orf87	Q6PH81	154 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	CABP7	Q86V35	215 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TC2N	Q8N9U0	490 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MRRF	Q96E11	262 aa	Known RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	NYX	Q9GZU5	481 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	FAM207A	Q9NSI2	230 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	SCHIP1	Q9P0W5	487 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	HPSE	Q9Y251	543 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ATP5H	O75947	161 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	CCDC159	P0C7I6	412 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	EIF6	P56537	245 aa	Known RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	SLC8A3	P57103	927 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	RAD51AP2	Q09MP3	1159 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KLHL30	Q0D2K2	578 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	NTRK3	Q16288	839 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ARHGEF18	Q6ZSZ5	1173 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ADGRG1	Q9Y653	693 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	GNPAT	O15228	680 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MFAP3L	O75121	409 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	DDAH1	O94760	285 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	NONO	Q15233	471 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ERFE	Q4G0M1	354 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MUM1L1	Q5H9M0	696 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	CAPRIN2	Q6IMN6	1127 aa	Known RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MCF2L2	Q86YR7	1114 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	CCDC117	Q8IWD4	279 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TEX11	Q8IYF3	940 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ANKRD35	Q8N283	1001 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	PPWD1	Q96BP3	646 aa	Known RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	SERPINI1	Q99574	410 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	L2HGDH	Q9H9P8	463 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	SLC24A3	Q9HC58	644 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	GPC4	O75487	556 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	APOA1	P02647	267 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TEC	P42680	631 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TOB1	P50616	345 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	RNASE9	P60153	205 aa	Known RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	DCAF17	Q5H9S7	520 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	PDXDC1	Q6P996	788 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	REXO1L1P	Q8IX06	675 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	PALM2	Q8IXS6	379 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	FBXL16	Q8N461	479 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	LRRN4CL	Q8ND94	238 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KRT12	Q99456	494 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MAP3K14	Q99558	947 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	POLR3C	Q9BUI4	534 aa	Predicted RBP	6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	STK24	Q9Y6E0	443 aa		6.63	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KLRF2	D3W0D1	207 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	USP17L8	P0C7I0	530 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	CYP2D6	P10635	497 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	PYGB	P11216	843 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	DNM2	P50570	870 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	GUCY2F	P51841	1108 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	HNRNPH2	P55795	449 aa	Known RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MMEL1	Q495T6	779 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	OGFOD1	Q8N543	542 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	DIABLO	Q9NR28	239 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ARPP21	Q9UBL0	812 aa	Predicted RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	LRWD1	Q9UFC0	647 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	SMCO2	A6NFE2	343 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	RASSF10	A6NK89	507 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MCF2L	O15068	1137 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KRT4	P19013	534 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MAN1A1	P33908	653 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KIAA2013	Q8IYS2	634 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	GPCPD1	Q9NPB8	672 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ATP8A2	Q9NTI2	1148 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	RNF14	Q9UBS8	474 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	PARP3	Q9Y6F1	533 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997		B4DLN1	442 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ZMYND10	O75800	440 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ZNF658	Q5TYW1	1059 aa	Predicted RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	SFMBT2	Q5VUG0	894 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TYW1B	Q6NUM6	668 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ZNF804A	Q7Z570	1209 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	C2CD5	Q86YS7	1000 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TUBGCP2	Q9BSJ2	902 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	YIPF3	Q9GZM5	350 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MRPL44	Q9H9J2	332 aa	Known RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	BIN2	Q9UBW5	565 aa	Predicted RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	RTCB	Q9Y3I0	505 aa	Known RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TRIM49B	A6NDI0	452 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	KRIT1	O00522	736 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	THAP12	O43422	761 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TRPA1	O75762	1119 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	BCR	P11274	1271 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	EEF1B2	P24534	225 aa	Known RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	TRAPPC10	P48553	1259 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ST5	P78524	1137 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	MECOM	Q03112	1051 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	NR1I3	Q14994	352 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	NKX1-1	Q15270	411 aa	Predicted RBP	6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	ALS2CL	Q60I27	953 aa		6.62	□□□□□ -1.35
HNRNPU-208	ENST00000475997	NCAPH2	Q6IBW4	605 aa		6.62	□□□□□ -1.35

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