RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 CELF3Q5SZQ8 465 aaKnown RBP23.66■■□□□ 1.38
HDAC11-217ENST00000475818 GPATCH4Q5T3I0 446 aaKnown RBP23.66■■□□□ 1.38
HDAC11-217ENST00000475818 DCTPP1Q9H773 170 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 ZDBF2Q9HCK1 2354 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 C5orf42Q9H799 3197 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 ZFHX2Q9C0A1 2572 aaPredicted RBP23.65■■□□□ 1.38
HDAC11-217ENST00000475818 RALGAPA2Q2PPJ7 1873 aa23.65■■□□□ 1.38
HDAC11-217ENST00000475818 VCPP55072 806 aaKnown RBP23.65■■□□□ 1.38
HDAC11-217ENST00000475818 HAND2P61296 217 aa23.65■■□□□ 1.38
HDAC11-217ENST00000475818 MIER1Q8N108 512 aa23.65■■□□□ 1.38
HDAC11-217ENST00000475818 ALG13Q9NP73 1137 aaKnown RBP23.65■■□□□ 1.38
HDAC11-217ENST00000475818 TRIOO75962 3097 aa23.65■■□□□ 1.38
HDAC11-217ENST00000475818 ADGRA3Q8IWK6 1321 aa23.64■■□□□ 1.38
HDAC11-217ENST00000475818 RGS20O76081 388 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 CFBP00751 764 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 QRICH1Q2TAL8 776 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 ADGRF4Q8IZF3 695 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 ATOH1Q92858 354 aaPredicted RBP23.64■■□□□ 1.37
HDAC11-217ENST00000475818 APBB2Q92870 758 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 ZFP91Q96JP5 570 aaPredicted RBP23.64■■□□□ 1.37
HDAC11-217ENST00000475818 MSLNLQ96KJ4 702 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 TTC14Q96N46 770 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 ZKSCAN3Q9BRR0 538 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 MAF1Q9H063 256 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 RNPEPQ9H4A4 650 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 MRPL11Q9Y3B7 192 aaKnown RBP23.64■■□□□ 1.37
HDAC11-217ENST00000475818 RWDD3Q9Y3V2 267 aa23.64■■□□□ 1.37
HDAC11-217ENST00000475818 H3BRB1 525 aa23.63■■□□□ 1.37
HDAC11-217ENST00000475818 FGAP02671 866 aa23.63■■□□□ 1.37
HDAC11-217ENST00000475818 MMP1P03956 469 aa23.63■■□□□ 1.37
HDAC11-217ENST00000475818 HSPD1P10809 573 aaKnown RBP23.63■■□□□ 1.37
HDAC11-217ENST00000475818 UBA1P22314 1058 aaKnown RBP23.63■■□□□ 1.37
HDAC11-217ENST00000475818 HOXC8P31273 242 aa23.63■■□□□ 1.37
HDAC11-217ENST00000475818 SP2Q02086 613 aa23.63■■□□□ 1.37
HDAC11-217ENST00000475818 ALX1Q15699 326 aa23.63■■□□□ 1.37
HDAC11-217ENST00000475818 TUT1Q9H6E5 874 aaKnown RBP23.63■■□□□ 1.37
HDAC11-217ENST00000475818 LOC730098B7Z3J9 87 aa23.62■■□□□ 1.37
HDAC11-217ENST00000475818 DHX16O60231 1041 aaKnown RBP23.62■■□□□ 1.37
HDAC11-217ENST00000475818 CAND2O75155 1236 aa23.62■■□□□ 1.37
HDAC11-217ENST00000475818 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
HDAC11-217ENST00000475818 GPKOWQ92917 476 aaPredicted RBP eCLIP23.62■■□□□ 1.37
HDAC11-217ENST00000475818 MLXIPQ9HAP2 919 aa23.62■■□□□ 1.37
HDAC11-217ENST00000475818 VAT1LQ9HCJ6 419 aa23.62■■□□□ 1.37
HDAC11-217ENST00000475818 SETD4Q9NVD3 440 aa23.62■■□□□ 1.37
HDAC11-217ENST00000475818 CLEC1BQ9P126 229 aa23.62■■□□□ 1.37
HDAC11-217ENST00000475818 EYA4O95677 639 aa23.61■■□□□ 1.37
HDAC11-217ENST00000475818 LGALS2P05162 132 aa23.61■■□□□ 1.37
HDAC11-217ENST00000475818 CAMK1Q14012 370 aa23.61■■□□□ 1.37
HDAC11-217ENST00000475818 BTG3Q14201 252 aaPredicted RBP23.61■■□□□ 1.37
HDAC11-217ENST00000475818 C20orf194Q5TEA3 1177 aa23.61■■□□□ 1.37
HDAC11-217ENST00000475818 ADGRD2Q7Z7M1 963 aa23.61■■□□□ 1.37
HDAC11-217ENST00000475818 PDCD2LQ9BRP1 358 aa23.61■■□□□ 1.37
HDAC11-217ENST00000475818 CCDC171Q6TFL3 1326 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 KMT2EQ8IZD2 1858 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 FOXK2Q01167 660 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 SIGLEC14Q08ET2 396 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 SMRP1Q8NCR6 262 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 IL31RAQ8NI17 732 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 CLP1Q92989 425 aaKnown RBP23.6■■□□□ 1.37
HDAC11-217ENST00000475818 RPGRIP1Q96KN7 1286 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 BCAS3Q9H6U6 928 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 RC3H2Q9HBD1 1191 aaKnown RBP23.6■■□□□ 1.37
HDAC11-217ENST00000475818 PLAGL2Q9UPG8 496 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 USP15Q9Y4E8 981 aaPredicted RBP23.6■■□□□ 1.37
HDAC11-217ENST00000475818 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
HDAC11-217ENST00000475818 MYH7BA7E2Y1 1941 aa23.6■■□□□ 1.37
HDAC11-217ENST00000475818 CACNA1HO95180 2353 aa23.59■■□□□ 1.37
HDAC11-217ENST00000475818 GHRP10912 638 aa23.59■■□□□ 1.37
HDAC11-217ENST00000475818 DNAJB1P25685 340 aa23.59■■□□□ 1.37
HDAC11-217ENST00000475818 KCNV1Q6PIU1 500 aa23.59■■□□□ 1.37
HDAC11-217ENST00000475818 MFSD6Q6ZSS7 791 aa23.59■■□□□ 1.37
HDAC11-217ENST00000475818 TBC1D10CQ8IV04 446 aa23.59■■□□□ 1.37
HDAC11-217ENST00000475818 BARX2Q9UMQ3 279 aaPredicted RBP23.59■■□□□ 1.37
HDAC11-217ENST00000475818 CFAP54Q96N23 3096 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 H0Y858 1186 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 OPLAHO14841 1288 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 AVPR2P30518 371 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 HSD17B4P51659 736 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 CBX2Q14781 532 aaPredicted RBP23.58■■□□□ 1.37
HDAC11-217ENST00000475818 RBM23Q86U06 439 aaKnown RBP23.58■■□□□ 1.37
HDAC11-217ENST00000475818 EFHBQ8N7U6 833 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 PNMA1Q8ND90 353 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 PPP2R3CQ969Q6 453 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 JMJD4Q9H9V9 463 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 TLR9Q9NR96 1032 aa23.58■■□□□ 1.37
HDAC11-217ENST00000475818 GNAT1P11488 350 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 HOXA13P31271 388 aaPredicted RBP23.57■■□□□ 1.36
HDAC11-217ENST00000475818 NRIP1P48552 1158 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 ARHGAP4P98171 946 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 COASYQ13057 564 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 PGM5Q15124 567 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 FAM26DQ5JW98 314 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 TRIM50Q86XT4 487 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 ASIC4Q96FT7 647 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 FAM227BQ96M60 508 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 PLVAPQ9BX97 442 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 HELLSQ9NRZ9 838 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 MRPL42Q9Y6G3 142 aaKnown RBP23.57■■□□□ 1.36
HDAC11-217ENST00000475818 NEDD4P46934 1319 aa23.57■■□□□ 1.36
HDAC11-217ENST00000475818 NOP56O00567 594 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms