RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZFP91Q96JP5 570 aaPredicted RBP17.87■□□□□ 0.45
CPSF3-203ENST00000475482 GUCD1Q96NT3 240 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 PSTPIP2Q9H939 334 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 STXBP5LQ9Y2K9 1186 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 MYO9BQ13459 2157 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 TMEM265A0A087WTH1 108 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 GGPS1O95749 300 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 CCL23P55773 120 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 RTN1Q16799 776 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 GNPTABQ3T906 1256 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 FAM47CQ5HY64 1035 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 SMARCC2Q8TAQ2 1214 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 PPP1R13LQ8WUF5 828 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 CUL5Q93034 780 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 BCAS3Q9H6U6 928 aa17.86■□□□□ 0.45
CPSF3-203ENST00000475482 hCG_1642624A0A1W2PR95 340 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 CDC27P30260 824 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 RBL2Q08999 1139 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 ST3GAL1Q11201 340 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 ZNF697Q5TEC3 545 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 GDF6Q6KF10 455 aaPredicted RBP17.85■□□□□ 0.45
CPSF3-203ENST00000475482 SPATA33Q96N06 139 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 SENP7Q9BQF6 1050 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 C16orf70Q9BSU1 422 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
CPSF3-203ENST00000475482 SEMA6BQ9H3T3 888 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 GTF2IRD1Q9UHL9 959 aa17.85■□□□□ 0.45
CPSF3-203ENST00000475482 FIBPO43427 364 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 FGBP02675 491 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 PFKMP08237 780 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 PSEN2P49810 448 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 NEDD9Q14511 834 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 METTL7BQ6UX53 244 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 RPUSD2Q8IZ73 545 aaKnown RBP17.84■□□□□ 0.45
CPSF3-203ENST00000475482 NSUN7Q8NE18 718 aaKnown RBP17.84■□□□□ 0.45
CPSF3-203ENST00000475482 SCLYQ96I15 445 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 KATNAL1Q9BW62 490 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 NCOA5Q9HCD5 579 aaKnown RBP17.84■□□□□ 0.45
CPSF3-203ENST00000475482 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
CPSF3-203ENST00000475482 HDAC6Q9UBN7 1215 aa17.84■□□□□ 0.45
CPSF3-203ENST00000475482 hCG_1984214I3L0E3 225 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 STX6O43752 255 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 IQCF3P0C7M6 154 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 ZNF286BP0CG31 522 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 MFSD10Q14728 455 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 PTGISQ16647 500 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 KIAA0753Q2KHM9 967 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 LARP1BQ659C4 914 aaKnown RBP17.83■□□□□ 0.44
CPSF3-203ENST00000475482 PPP1R18Q6NYC8 613 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 TRIM22Q8IYM9 498 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 ZNF713Q8N859 430 aaPredicted RBP17.83■□□□□ 0.44
CPSF3-203ENST00000475482 WASF1Q92558 559 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 DHX38Q92620 1227 aaKnown RBP17.83■□□□□ 0.44
CPSF3-203ENST00000475482 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 RTEL1Q9NZ71 1219 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.44
CPSF3-203ENST00000475482 V9GY48 417 aaPredicted RBP17.83■□□□□ 0.44
CPSF3-203ENST00000475482 GBF1Q92538 1859 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 HOXC8P31273 242 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 RFC2P35250 354 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 BFSP2Q13515 415 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 UBE2SQ16763 222 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 HEATR3Q7Z4Q2 680 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 CAGE1Q8TC20 777 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 GPRASP2Q96D09 838 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 UBIAD1Q9Y5Z9 338 aa17.82■□□□□ 0.44
CPSF3-203ENST00000475482 ITGB5P18084 799 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 SYT1P21579 422 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 DNAJB2P25686 324 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
CPSF3-203ENST00000475482 HIC1Q14526 733 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 GPNMBQ14956 572 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 AFAP1L1Q8TED9 768 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 GPR20Q99678 358 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 PBX4Q9BYU1 374 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 BARHL2Q9NY43 387 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 PCDHA6Q9UN73 950 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 PCDHA8Q9Y5H6 950 aa17.81■□□□□ 0.44
CPSF3-203ENST00000475482 STK36Q9NRP7 1315 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 H3BQV1 296 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 STXBP3O00186 592 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 SORBS3O60504 671 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 BRD1O95696 1058 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 LGALS2P05162 132 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 KCNA2P16389 499 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 IFNAR1P17181 557 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 CLK2P49760 499 aaKnown RBP17.8■□□□□ 0.44
CPSF3-203ENST00000475482 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
CPSF3-203ENST00000475482 TRIM71Q2Q1W2 868 aaKnown RBP17.8■□□□□ 0.44
CPSF3-203ENST00000475482 CYFIP1Q7L576 1253 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 OTOP2Q7RTS6 562 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 NLRX1Q86UT6 975 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 C7orf31Q8N865 590 aa17.8■□□□□ 0.44
CPSF3-203ENST00000475482 RETREG2Q8NC44 543 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms