RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TOMM70O94826 608 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 ERCC3P19447 782 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 BMP6P22004 513 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 RPA1P27694 616 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 ERVK-24P63145 666 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 CCDC173Q0VFZ6 552 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 MCM6Q14566 821 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 ECM1Q16610 540 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 NLRX1Q86UT6 975 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 DHX40Q8IX18 779 aaKnown RBP15.38■□□□□ 0.05
TRAF4-210ENST00000475329 SHCBP1Q8NEM2 672 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 IWS1Q96ST2 819 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 C7orf25Q9BPX7 421 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 POLR3CQ9BUI4 534 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-210ENST00000475329 MROH8Q9H579 483 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 MCM3APO60318 1980 aa15.38■□□□□ 0.05
TRAF4-210ENST00000475329 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 SMTNL1A8MU46 457 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 EML1O00423 815 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 CHMP2AO43633 222 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 CYP2C8P10632 490 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 HSPA6P17066 643 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 GCLCP48506 637 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 TPM4P67936 248 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 ASIC1P78348 528 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 CCNA1P78396 465 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 DHX8Q14562 1220 aaKnown RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 KCNB1Q14721 858 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 CT47A1Q5JQC4 288 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 RASAL3Q86YV0 1011 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 KCTD17Q8N5Z5 321 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 NEK9Q8TD19 979 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 PARK7Q99497 189 aaKnown RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 TRIM9Q9C026 710 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 UNC45AQ9H3U1 944 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 TUFT1Q9NNX1 390 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 TBC1D22BQ9NU19 505 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
TRAF4-210ENST00000475329 KIAA1024Q9UPX6 916 aa15.37■□□□□ 0.05
TRAF4-210ENST00000475329 MYH11P35749 1972 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 ARID2Q68CP9 1835 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 ZNF236Q9UL36 1845 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 POTEFA5A3E0 1075 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 IKBKBO14920 756 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 SPATA31C1P0DKV0 1188 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 MUTP22033 750 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 ALDH5A1P51649 535 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 ZNF157P51786 506 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 MYL5Q02045 173 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 EPHA7Q15375 998 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 GNPTABQ3T906 1256 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 ZNF658Q5TYW1 1059 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 POTEGQ6S5H5 508 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 B3GNT9Q6UX72 402 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 KCNK18Q7Z418 384 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 CATSPER3Q86XQ3 398 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 GPRC5AQ8NFJ5 357 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 CDHR1Q96JP9 859 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 MMP19Q99542 508 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 MPHOSPH6Q99547 160 aaKnown RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 GTPBP4Q9BZE4 634 aaKnown RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 MYH9P35579 1960 aaKnown RBP15.36■□□□□ 0.05
TRAF4-210ENST00000475329 PASKQ96RG2 1323 aa15.36■□□□□ 0.05
TRAF4-210ENST00000475329 MYMKA6NI61 221 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 B4DLN1 442 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 DDX39AO00148 427 aaKnown RBP15.35■□□□□ 0.05
TRAF4-210ENST00000475329 MAFGO15525 162 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 KLRC4O43908 158 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 CNTN2Q02246 1040 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 CYP4A11Q02928 519 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 ITGB3BPQ13352 177 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-210ENST00000475329 KCTD2Q14681 263 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 STXBP2Q15833 593 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 Q3C1V9 767 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 KMT5BQ4FZB7 885 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 CNNM4Q6P4Q7 775 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 MIER3Q7Z3K6 550 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 FAM133AQ8N9E0 248 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 EXOC1Q9NV70 894 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 MORF4L1Q9UBU8 362 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 DNM3Q9UQ16 869 aa15.35■□□□□ 0.05
TRAF4-210ENST00000475329 MANSC4A6NHS7 340 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-210ENST00000475329 E9PMD0 336 aa15.34■□□□□ 0.05
TRAF4-210ENST00000475329 KIF3CO14782 793 aa15.34■□□□□ 0.05
TRAF4-210ENST00000475329 DHX15O43143 795 aaKnown RBP15.34■□□□□ 0.05
TRAF4-210ENST00000475329 RHOBTB3O94955 611 aa15.34■□□□□ 0.05
TRAF4-210ENST00000475329 SSBP05455 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAF4-210ENST00000475329 PLA2G4BP0C869 781 aa15.34■□□□□ 0.05
TRAF4-210ENST00000475329 FCER1AP12319 257 aa15.34■□□□□ 0.05
TRAF4-210ENST00000475329 ERCC5P28715 1186 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-210ENST00000475329 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms