RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ZNF668Q96K58 619 aaPredicted RBP10.51□□□□□ -0.73
CDH23-211ENST00000475158 WDR24Q96S15 920 aa10.51□□□□□ -0.73
CDH23-211ENST00000475158 AP1M1Q9BXS5 423 aa10.51□□□□□ -0.73
CDH23-211ENST00000475158 DNAJC17Q9NVM6 304 aaKnown RBP10.51□□□□□ -0.73
CDH23-211ENST00000475158 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
CDH23-211ENST00000475158 USP42Q9H9J4 1324 aaKnown RBP10.51□□□□□ -0.73
CDH23-211ENST00000475158 POLGP54098 1239 aaPredicted RBP10.51□□□□□ -0.73
CDH23-211ENST00000475158 TNFAIP1Q13829 316 aa10.51□□□□□ -0.73
CDH23-211ENST00000475158 SEPT14Q6ZU15 432 aa10.51□□□□□ -0.73
CDH23-211ENST00000475158 PNMA6FA0A0J9YX94 578 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 LAD1O00515 517 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 SATB1Q01826 763 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 SYDE2Q5VT97 1194 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CASC4Q6P4E1 433 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 RPUSD2Q8IZ73 545 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 SYCE1Q8N0S2 351 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CEP170P1Q96L14 293 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 MMS19Q96T76 1030 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 STMN4Q9H169 189 aaPredicted RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 VPS37BQ9H9H4 285 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 ABCB6Q9NP58 842 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 KIF1CO43896 1103 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 CSF1RP07333 972 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CRKP46108 304 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 AOC3Q16853 763 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 ARL6IP4Q66PJ3 421 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDH23-211ENST00000475158 CALR3Q96L12 384 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 METTL14Q9HCE5 456 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 FAM184BQ9ULE4 1060 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CSADQ9Y600 493 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CLTCQ00610 1675 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 ALX1Q15699 326 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 GNPTABQ3T906 1256 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 RUFY4Q6ZNE9 571 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 APBB1IPQ7Z5R6 666 aaPredicted RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 MSANTD4Q8NCY6 345 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 MAGOHBQ96A72 148 aaKnown RBP10.5□□□□□ -0.73
CDH23-211ENST00000475158 CHP1Q99653 195 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 ZNF341Q9BYN7 854 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 CUEDC2Q9H467 287 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 SWAP70Q9UH65 585 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 FAM169AQ9Y6X4 670 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 MROH7-TTC4A0A0A0MT08 1334 aa10.5□□□□□ -0.73
CDH23-211ENST00000475158 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 ESYT3A0FGR9 886 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 SLCO1A2P46721 670 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 ACTN3Q08043 901 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 DMP1Q13316 513 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 MTERF2Q49AM1 385 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 FAM83BQ5T0W9 1011 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 DENND2CQ68D51 928 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 STK17AQ9UEE5 414 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 FBXO2Q9UK22 296 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 PACSIN2Q9UNF0 486 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 PIK3C2BO00750 1634 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 RGS16O15492 202 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 CAMTA2O94983 1202 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 AFPP02771 609 aaKnown RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 ADCY8P40145 1251 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 PLTPP55058 493 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 MYL7Q01449 175 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 TRIM68Q6AZZ1 485 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 SFR1Q86XK3 245 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 ZNF34Q8IZ26 560 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 RNF34Q969K3 372 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 HOOK2Q96ED9 719 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 TSNARE1Q96NA8 513 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 APOL6Q9BWW8 343 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 CAPS2Q9BXY5 557 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 COA1Q9GZY4 146 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 ABHD10Q9NUJ1 306 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 HPS5Q9UPZ3 1129 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 ATP8A1Q9Y2Q0 1164 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 F5H6K3 240 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 INO80B-WBP1J3KQ70 363 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 DKC1O60832 514 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDH23-211ENST00000475158 CHRNA5P30532 468 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 KLRC3Q07444 240 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 Q3C1V9 767 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 ALKBH5Q6P6C2 394 aaKnown RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 RPGRIP1Q96KN7 1286 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 INO80BQ9C086 356 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 UBE2TQ9NPD8 197 aaPredicted RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
CDH23-211ENST00000475158 TPX2Q9ULW0 747 aaKnown RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 MAP2P11137 1827 aaKnown RBP10.49□□□□□ -0.73
CDH23-211ENST00000475158 WTIPA6NIX2 430 aaPredicted RBP10.48□□□□□ -0.73
CDH23-211ENST00000475158 GAS8O95995 478 aa10.48□□□□□ -0.73
CDH23-211ENST00000475158 TRIP13Q15645 432 aaPredicted RBP10.48□□□□□ -0.73
CDH23-211ENST00000475158 E4F1Q66K89 784 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms