RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ARP10275 920 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 U2AF2P26368 475 aaKnown RBP eCLIP19.27■□□□□ 0.685e-8■■■■■ 30.4
SCAF11-206ENST00000474828 CDK7P50613 346 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 HSDL1Q3SXM5 330 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 FAM184AQ8NB25 1140 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 AFG1LQ8WV93 481 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 BRMS1Q9HCU9 246 aa19.27■□□□□ 0.68
SCAF11-206ENST00000474828 GJB2P29033 226 aa19.26■□□□□ 0.67
SCAF11-206ENST00000474828 ITGB3BPQ13352 177 aaPredicted RBP19.26■□□□□ 0.67
SCAF11-206ENST00000474828 BRDTQ58F21 947 aaPredicted RBP19.26■□□□□ 0.67
SCAF11-206ENST00000474828 SLC39A5Q6ZMH5 540 aa19.26■□□□□ 0.67
SCAF11-206ENST00000474828 HTATIP2Q9BUP3 242 aa19.26■□□□□ 0.67
SCAF11-206ENST00000474828 SENP6Q9GZR1 1112 aaPredicted RBP19.26■□□□□ 0.67
SCAF11-206ENST00000474828 GRIN2DO15399 1336 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 CCDC194A0A1B0GVG4 234 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 GCFC2P16383 781 aaKnown RBP19.25■□□□□ 0.67
SCAF11-206ENST00000474828 INF2Q27J81 1249 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 LRRC26Q2I0M4 334 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 CYFIP1Q7L576 1253 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 ANKRD33Q7Z3H0 272 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 NEK8Q86SG6 692 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 PLA2G4DQ86XP0 818 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 KAT2BQ92831 832 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 GLT1D1Q96MS3 346 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 GPR20Q99678 358 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 PCDH10Q9P2E7 1040 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 SMC3Q9UQE7 1217 aa19.25■□□□□ 0.67
SCAF11-206ENST00000474828 SCN10AQ9Y5Y9 1956 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 HAS3O00219 553 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 ATG7O95352 703 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 F2P00734 622 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 ZNF76P36508 570 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 SAFBQ15424 915 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCAF11-206ENST00000474828 DGKDQ16760 1214 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 B3GNT9Q6UX72 402 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 CXCL17Q6UXB2 119 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 PIK3AP1Q6ZUJ8 805 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 SLC5A5Q92911 643 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 SPATA33Q96N06 139 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 TOX2Q96NM4 488 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 NAP1L4Q99733 375 aaKnown RBP19.24■□□□□ 0.67
SCAF11-206ENST00000474828 C16orf70Q9BSU1 422 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 MTG1Q9BT17 334 aaPredicted RBP19.24■□□□□ 0.67
SCAF11-206ENST00000474828 MLXIPQ9HAP2 919 aa19.24■□□□□ 0.67
SCAF11-206ENST00000474828 ALPK3Q96L96 1907 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 FAM205CA6NFA0 338 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 IPO5O00410 1097 aaKnown RBP19.23■□□□□ 0.67
SCAF11-206ENST00000474828 SESTD1Q86VW0 696 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 ETNPPLQ8TBG4 499 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 RIT2Q99578 217 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 KCNMB3Q9NPA1 279 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 STARD7Q9NQZ5 370 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 TBC1D22BQ9NU19 505 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 TELO2Q9Y4R8 837 aa19.23■□□□□ 0.67
SCAF11-206ENST00000474828 IGKV6D-21A0A0A0MT36 114 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 A0A0U1RQG5 324 aaPredicted RBP19.22■□□□□ 0.67
SCAF11-206ENST00000474828 GSTTP1A0A1W2PQM5 241 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 ARVCFO00192 962 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 TBX3O15119 743 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 MSH4O15457 936 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 TDP2O95551 362 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 GUCY1B3Q02153 619 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 PRR16Q569H4 304 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 NOSTRINQ8IVI9 506 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 FERMT2Q96AC1 680 aa19.22■□□□□ 0.67
SCAF11-206ENST00000474828 JPH1Q9HDC5 661 aaPredicted RBP19.22■□□□□ 0.67
SCAF11-206ENST00000474828 KIF28PB7ZC32 967 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 LGR5O75473 907 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 CCNE2O96020 404 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 HOXC8P31273 242 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 TRAPPC10P48553 1259 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 PTPN11Q06124 597 aaPredicted RBP19.21■□□□□ 0.67
SCAF11-206ENST00000474828 ORC2Q13416 577 aaPredicted RBP19.21■□□□□ 0.67
SCAF11-206ENST00000474828 NFRKBQ6P4R8 1299 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 SEPT1Q8WYJ6 367 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 ZNF577Q9BSK1 485 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 SLC9A2Q9UBY0 812 aa19.21■□□□□ 0.67
SCAF11-206ENST00000474828 SLC37A4O43826 429 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 PSMD10O75832 226 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
SCAF11-206ENST00000474828 ITGA7Q13683 1181 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 ZNF746Q6NUN9 644 aaPredicted RBP19.2■□□□□ 0.66
SCAF11-206ENST00000474828 FAM20AQ96MK3 541 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 SDF4Q9BRK5 362 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 DDX25Q9UHL0 483 aaKnown RBP19.2■□□□□ 0.66
SCAF11-206ENST00000474828 EMSYQ7Z589 1322 aa19.2■□□□□ 0.66
SCAF11-206ENST00000474828 WNT7AO00755 349 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 CD4P01730 458 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 LGALS2P05162 132 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 MYL3P08590 195 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 PDCP20941 246 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 RTP1P59025 263 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 ACTR2P61160 394 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 LARP1BQ659C4 914 aaKnown RBP19.19■□□□□ 0.66
SCAF11-206ENST00000474828 ABHD15Q6UXT9 468 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 HAS1Q92839 578 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 KATNAL1Q9BW62 490 aa19.19■□□□□ 0.66
SCAF11-206ENST00000474828 MROH7Q68CQ1 1323 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms