RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CCT6AP40227 531 aaKnown RBP23.45■■□□□ 1.35
SH3D21-202ENST00000474766 IRF2BP1Q8IU81 584 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 CDAN1Q8IWY9 1227 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 LRRC15Q8TF66 581 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 MMS19Q96T76 1030 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 DDX4Q9NQI0 724 aaKnown RBP23.45■■□□□ 1.35
SH3D21-202ENST00000474766 GOLGA6AQ9NYA3 693 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 GUCA1BQ9UMX6 200 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 GSCP56915 257 aaPredicted RBP23.45■■□□□ 1.34
SH3D21-202ENST00000474766 ORC2Q13416 577 aaPredicted RBP23.45■■□□□ 1.34
SH3D21-202ENST00000474766 OR8K1Q8NGG5 319 aa23.45■■□□□ 1.34
SH3D21-202ENST00000474766 SELENOOQ9BVL4 669 aa23.45■■□□□ 1.34
SH3D21-202ENST00000474766 IDI2Q9BXS1 227 aa23.45■■□□□ 1.34
SH3D21-202ENST00000474766 FAM198AQ9UFP1 575 aa23.45■■□□□ 1.34
SH3D21-202ENST00000474766 SEC63Q9UGP8 760 aaKnown RBP23.45■■□□□ 1.34
SH3D21-202ENST00000474766 SSC5DA1L4H1 1573 aa23.45■■□□□ 1.34
SH3D21-202ENST00000474766 GOLGA8KD6RF30 607 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 hCG_1984214I3L0E3 225 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 MYH8P13535 1937 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 KRT83P78385 493 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 GABPAQ06546 454 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 CCDC70Q6NSX1 233 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 NEK8Q86SG6 692 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 ZNF713Q8N859 430 aaPredicted RBP23.44■■□□□ 1.34
SH3D21-202ENST00000474766 GIMAP8Q8ND71 665 aaPredicted RBP23.44■■□□□ 1.34
SH3D21-202ENST00000474766 RASSF8Q8NHQ8 419 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 TMEM39BQ9GZU3 492 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 PLEKHA4Q9H4M7 779 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 CREBZFQ9NS37 354 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 TMOD2Q9NZR1 351 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 FAM184BQ9ULE4 1060 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 FAM169AQ9Y6X4 670 aa23.44■■□□□ 1.34
SH3D21-202ENST00000474766 USP17L5A8MUK1 530 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 TNFAIP1Q13829 316 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 ZBTB9Q96C00 473 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 PIGSQ96S52 555 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 DNAJC7Q99615 494 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 VPS16Q9H269 839 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 TAB2Q9NYJ8 693 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 MAPK8IP1Q9UQF2 711 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 A0A1W2PQC6 194 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 GOLGA6BA6NDN3 693 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 ANKRD65E5RJM6 399 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 RNF225M0QZC1 329 aaPredicted RBP23.43■■□□□ 1.34
SH3D21-202ENST00000474766 CCNT1O60563 726 aaKnown RBP23.43■■□□□ 1.34
SH3D21-202ENST00000474766 PDHBP11177 359 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 LETM2Q2VYF4 491 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 FKBP1CQ5VVH2 108 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 ZFPM1Q8IX07 1006 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 AENQ8WTP8 325 aaKnown RBP23.43■■□□□ 1.34
SH3D21-202ENST00000474766 TEPSINQ96N21 525 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 MTMR4Q9NYA4 1195 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 PPP2R3BQ9Y5P8 575 aa23.43■■□□□ 1.34
SH3D21-202ENST00000474766 EIF3HO15372 352 aaKnown RBP eCLIP23.42■■□□□ 1.34
SH3D21-202ENST00000474766 ATP1A1P05023 1023 aaKnown RBP23.42■■□□□ 1.34
SH3D21-202ENST00000474766 ITIH3Q06033 890 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 RPAINQ86UA6 219 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 CABP7Q86V35 215 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 CAPS2Q9BXY5 557 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 IGKV6D-41A0A0C4DH26 115 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 PLCG1P19174 1290 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 CCT5P48643 541 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 PICALMQ13492 652 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 NBPF12Q5TAG4 269 aaPredicted RBP23.42■■□□□ 1.34
SH3D21-202ENST00000474766 SPATS2Q86XZ4 545 aaKnown RBP23.42■■□□□ 1.34
SH3D21-202ENST00000474766 CNKSR2Q8WXI2 1034 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 SH3GL2Q99962 352 aa23.42■■□□□ 1.34
SH3D21-202ENST00000474766 KRT86O43790 486 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 SNHG28P0DPA3 235 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 EPB41P11171 864 aaKnown RBP23.41■■□□□ 1.34
SH3D21-202ENST00000474766 EEF1GP26641 437 aaKnown RBP23.41■■□□□ 1.34
SH3D21-202ENST00000474766 PMS1P54277 932 aaKnown RBP23.41■■□□□ 1.34
SH3D21-202ENST00000474766 TCP10Q12799 353 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 FAM83AQ86UY5 434 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 REXO1Q8N1G1 1221 aaKnown RBP23.41■■□□□ 1.34
SH3D21-202ENST00000474766 CHP1Q99653 195 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 THAP9Q9H5L6 903 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 PAPPA2Q9BXP8 1791 aa23.41■■□□□ 1.34
SH3D21-202ENST00000474766 TRIM49BA6NDI0 452 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 OPA1O60313 960 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 TNNI2P48788 182 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 TSR1Q2NL82 804 aaKnown RBP23.4■■□□□ 1.34
SH3D21-202ENST00000474766 CCDC122Q5T0U0 273 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 ZNF572Q7Z3I7 529 aaPredicted RBP23.4■■□□□ 1.34
SH3D21-202ENST00000474766 TBCKQ8TEA7 893 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 JAKMIP2Q96AA8 810 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 PLIN2Q99541 437 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 UBA5Q9GZZ9 404 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 VAT1LQ9HCJ6 419 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 PSMA7O14818 248 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 SKOR1P84550 965 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 ASPRV1Q53RT3 343 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 MMGT1Q8N4V1 131 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 RIN2Q8WYP3 895 aaPredicted RBP23.4■■□□□ 1.34
SH3D21-202ENST00000474766 DHTKD1Q96HY7 919 aaPredicted RBP23.4■■□□□ 1.34
SH3D21-202ENST00000474766 C7orf25Q9BPX7 421 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 TRIM9Q9C026 710 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 GBA2Q9HCG7 927 aaPredicted RBP23.4■■□□□ 1.34
SH3D21-202ENST00000474766 HDAC6Q9UBN7 1215 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 CAPN11Q9UMQ6 739 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms