RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 PXMP2Q9NR77 195 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 MAP3K20Q9NYL2 800 aaKnown RBP23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 SRPRBQ9Y5M8 271 aaKnown RBP23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 ADGRA2Q96PE1 1338 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 CEP350Q5VT06 3117 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 VWA3AA6NCI4 1184 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 SLC25A27O95847 323 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 PGK2P07205 417 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 ELOA2Q8IYF1 753 aaPredicted RBP23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 KRI1Q8N9T8 703 aaKnown RBP23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 ERCC4Q92889 916 aaPredicted RBP23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 CSRNP2Q9H175 543 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 MORF4L1Q9UBU8 362 aa23.27■■□□□ 1.32
SMIM11A-204ENST00000474455 CYP3A4P08684 503 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 ETF1P62495 437 aaKnown RBP23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 SREBF2Q12772 1141 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 PGM5Q15124 567 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 PRR16Q569H4 304 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 GTF3C2Q8WUA4 911 aaPredicted RBP23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 LENG9Q96B70 501 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 HPSEQ9Y251 543 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 DOCK5Q9H7D0 1870 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 CYP3A7-CYP3A51PA0A087WV96 503 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 TPM1P09493 284 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 CYP3A7P24462 503 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 MRPS9P82933 396 aaKnown RBP23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 ARHGEF16Q5VV41 709 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 SYT10Q6XYQ8 523 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 SAMD3Q8N6K7 520 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 HAS1Q92839 578 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 MTMR9Q96QG7 549 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 FBXO40Q9UH90 709 aa23.26■■□□□ 1.31
SMIM11A-204ENST00000474455 MYCLP12524 364 aaPredicted RBP23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 ZNF76P36508 570 aa23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 SYKP43405 635 aa23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 MYL5Q02045 173 aa23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 CRHR2Q13324 411 aa23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 MBOAT7Q96N66 472 aa23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 PDCD2LQ9BRP1 358 aa23.25■■□□□ 1.31
SMIM11A-204ENST00000474455 IGLV3-22A0A075B6J6 115 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 CUTAO60888 179 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 CDC25AP30304 524 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 CIITAP33076 1130 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 CALCRLQ16602 461 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 TEX2Q8IWB9 1127 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 TMX1Q9H3N1 280 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 FRMPD4Q14CM0 1322 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 ZSWIM8A7E2V4 1837 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 BMP15O95972 392 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 OR52Z1P0C646 297 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 BCRP11274 1271 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 TXKP42681 527 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 NOGQ13253 232 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 FAM110CQ1W6H9 321 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 EPSTI1Q96J88 318 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 MMP19Q99542 508 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 MROH8Q9H579 483 aa23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 ARGLU1Q9NWB6 273 aaPredicted RBP23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 V9GYY5 206 aaPredicted RBP23.24■■□□□ 1.31
SMIM11A-204ENST00000474455 CCDC66A2RUB6 948 aa23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 SOWAHBA6NEL2 793 aa23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 ZSCAN12O43309 604 aa23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 TLR2O60603 784 aa23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 ITGB5P18084 799 aa23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 EHMT1Q9H9B1 1298 aa23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 ZCCHC17Q9NP64 241 aaKnown RBP23.23■■□□□ 1.31
SMIM11A-204ENST00000474455 GOLGA6L9A6NEM1 432 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 PP2D1A8MPX8 630 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 ARP10275 920 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 GCFC2P16383 781 aaKnown RBP23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 TECP42680 631 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 VEGFBP49765 207 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 Q4G0T1 1027 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 MOXD1Q6UVY6 613 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 C17orf99Q6UX52 265 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 SHCBP1Q8NEM2 672 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 WDR11Q9BZH6 1224 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 MGAMO43451 1857 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 PFASO15067 1338 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 BIN1O00499 593 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 NR3C2P08235 984 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 UBASH3AP57075 661 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 CEP55Q53EZ4 464 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 RESP18Q5W5W9 173 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 PCNX4Q63HM2 1172 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 ARL6IP4Q66PJ3 421 aaKnown RBP23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 DTHD1Q6ZMT9 781 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 FAM133AQ8N9E0 248 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 FGD4Q96M96 766 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 KCNMB3Q9NPA1 279 aa23.22■■□□□ 1.31
SMIM11A-204ENST00000474455 POTEB2H3BUK9 544 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 MSH4O15457 936 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 ATP8B1O43520 1251 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 FCER1AP12319 257 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 CCNA1P78396 465 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 KCTD2Q14681 263 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms