RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 GSTA4O15217 222 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 KCNQ2O43526 872 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 CLSTN1O94985 981 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 DBHP09172 617 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 GLI4P10075 376 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 TCEA2Q15560 299 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 FNDC3BQ53EP0 1204 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 FAM209AQ5JX71 171 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 YOD1Q5VVQ6 348 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 ZC3H14Q6PJT7 736 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 LBX2Q6XYB7 198 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 LILRB2Q8N423 598 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 CHAMP1Q96JM3 812 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 EXOC2Q96KP1 924 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 C1QTNF3Q9BXJ4 246 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 PIF1Q9H611 641 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 MARCH2Q9P0N8 246 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 DBR1Q9UK59 544 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 PLA2G2DQ9UNK4 145 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 RWDD3Q9Y3V2 267 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 PCDHA2Q9Y5H9 948 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 PMF1-BGLAPU3KQ54 211 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 IRS2Q9Y4H2 1338 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 B4E1Z4 1266 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 C22orf46C9J442 243 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 FAM47E-STBD1D6RA91 191 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 ENPP3O14638 875 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 NOBOXO60393 691 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 CDC45O75419 566 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 RFPL3O75679 317 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 DGKIO75912 1065 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 NPTXRO95502 500 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 FUCA1P04066 466 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 GRK2P25098 689 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 GRK3P35626 688 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 BCL6P41182 706 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 GJA9P57773 515 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 INF2Q27J81 1249 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 MBLAC2Q68D91 279 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 DENND5AQ6IQ26 1287 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 C16orf86Q6ZW13 317 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 CEP68Q76N32 757 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 SPRED1Q7Z699 444 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 SAPCD2Q86UD0 394 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 MTDHQ86UE4 582 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 PHOSPHO1Q8TCT1 267 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 PLEKHO2Q8TD55 490 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 TSPAN17Q96FV3 270 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 RNPC3Q96LT9 517 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 RNF38Q9H0F5 515 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 NCOA5Q9HCD5 579 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 PCDH18Q9HCL0 1135 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 NGRNQ9NPE2 291 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 CLDND1Q9NY35 253 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 PLAAQ9Y263 795 aa4.84□□□□□ -1.63
ECHDC1-213ENST00000474240 CYR61O00622 381 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 SPIRE1Q08AE8 756 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 PAK1Q13153 545 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 TARBP2Q15633 366 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 NTRK3Q16288 839 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 FAM47CQ5HY64 1035 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 TTC9BQ8N6N2 239 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 GSTCDQ8NEC7 633 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 FEZ1Q99689 392 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 BTG4Q9NY30 223 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 TMEFF2Q9UIK5 374 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
ECHDC1-213ENST00000474240 TLDC2A0PJX2 215 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 SH3D21A4FU49 640 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 WNT9AO14904 365 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 C6orf222P0C671 652 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 FBLN1P23142 703 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 TACR1P25103 407 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 FLT3P36888 993 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 ACVRL1P37023 503 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 HTRA3P83110 453 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 GUCY1A3Q02108 690 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 DLX2Q07687 328 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 EMC4Q5J8M3 183 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 FOXB2Q5VYV0 432 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 TEX2Q8IWB9 1127 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 TRIM48Q8IWZ4 208 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 SH3RF3Q8TEJ3 882 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 DPF3Q92784 378 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 MAGEB10Q96LZ2 347 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 SAMD11Q96NU1 681 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 SLKQ9H2G2 1235 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 INTS7Q9NVH2 962 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 TBX22Q9Y458 520 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 HCFC2Q9Y5Z7 792 aa4.82□□□□□ -1.64
ECHDC1-213ENST00000474240 F8W031 263 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 ARVCFO00192 962 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 HGSO14964 777 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 SOD2P04179 222 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 NTRK1P04629 796 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 ATF2P15336 505 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 HSD3B2P26439 372 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 FOXO4P98177 505 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 SQSTM1Q13501 440 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 CRIP3Q6Q6R5 217 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms