RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 BRCA2P51587 3418 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 MEIS1O00470 390 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 KCNA2P16389 499 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 PRR16Q569H4 304 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 ANKRD33Q7Z3H0 272 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 CYP2W1Q8TAV3 490 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 LBHD1Q9BQE6 289 aaPredicted RBP15.63■□□□□ 0.09
USF1-205ENST00000473969 TMEM39AQ9NV64 488 aa15.63■□□□□ 0.09
USF1-205ENST00000473969 KIAA1217Q5T5P2 1943 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 TNRC18O15417 2968 aaPredicted RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 ADAMTS3O15072 1205 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 ATP9AO75110 1047 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 CLTBP09497 229 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 SUPT20HL2P0C7V6 817 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 ARP10275 920 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 SYN1P17600 705 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 CDK7P50613 346 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 ST3GAL1Q11201 340 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 GNL2Q13823 731 aaKnown RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 NBPF20Q3BBV1 942 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 KRT40Q6A162 431 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 NAP1L4Q99733 375 aaKnown RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 AGO4Q9HCK5 861 aaKnown RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 JPH1Q9HDC5 661 aaPredicted RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 GJB4Q9NTQ9 266 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 ZNF215Q9UL58 517 aaPredicted RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 NOD1Q9Y239 953 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.62■□□□□ 0.09
USF1-205ENST00000473969 NFASCO94856 1347 aa15.62■□□□□ 0.09
USF1-205ENST00000473969 FAM86B1E9PN63 330 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 MMP1P03956 469 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 FAM86B2P0C5J1 330 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 ZNF286BP0CG31 522 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 CIITAP33076 1130 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 PSEN2P49810 448 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 PTPN11Q06124 597 aaPredicted RBP15.61■□□□□ 0.09
USF1-205ENST00000473969 INF2Q27J81 1249 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 UTP14CQ5TAP6 766 aaKnown RBP15.61■□□□□ 0.09
USF1-205ENST00000473969 NFRKBQ6P4R8 1299 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 PIK3AP1Q6ZUJ8 805 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 C7orf31Q8N865 590 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 CRYGNQ8WXF5 182 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 GPR20Q99678 358 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 TBC1D22BQ9NU19 505 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 SLC9A2Q9UBY0 812 aa15.61■□□□□ 0.09
USF1-205ENST00000473969 M0R2N6 131 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 IPO5O00410 1097 aaKnown RBP15.6■□□□□ 0.09
USF1-205ENST00000473969 MARCH6O60337 910 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 RAG1P15918 1043 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 MFSD10Q14728 455 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 NPY5RQ15761 445 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 LETM2Q2VYF4 491 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 NEK8Q86SG6 692 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 DIS3L2Q8IYB7 885 aaKnown RBP15.6■□□□□ 0.09
USF1-205ENST00000473969 SLC43A3Q8NBI5 491 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 AZI2Q9H6S1 392 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 BCAS3Q9H6U6 928 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 SMC3Q9UQE7 1217 aa15.6■□□□□ 0.09
USF1-205ENST00000473969 IGLV3-22A0A075B6J6 115 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 H3BRB1 525 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 DDX39AO00148 427 aaKnown RBP15.59■□□□□ 0.09
USF1-205ENST00000473969 CD2BP2O95400 341 aaKnown RBP15.59■□□□□ 0.09
USF1-205ENST00000473969 F2P00734 622 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 LGALS2P05162 132 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 HOXD8P13378 290 aaPredicted RBP15.59■□□□□ 0.09
USF1-205ENST00000473969 TCF7P36402 384 aaPredicted RBP15.59■□□□□ 0.09
USF1-205ENST00000473969 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 KIAA0753Q2KHM9 967 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 MOXD1Q6UVY6 613 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 FAM126BQ8IXS8 530 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 OXER1Q8TDS5 423 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 GLG1Q92896 1179 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 TUT1Q9H6E5 874 aaKnown RBP15.59■□□□□ 0.09
USF1-205ENST00000473969 PDLIM7Q9NR12 457 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 DDX25Q9UHL0 483 aaKnown RBP15.59■□□□□ 0.09
USF1-205ENST00000473969 GRIN2DO15399 1336 aa15.59■□□□□ 0.09
USF1-205ENST00000473969 BTBD18B2RXH4 712 aa15.58■□□□□ 0.08
USF1-205ENST00000473969 CCNT1O60563 726 aaKnown RBP15.58■□□□□ 0.08
USF1-205ENST00000473969 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
USF1-205ENST00000473969 FAAP100Q0VG06 881 aa15.58■□□□□ 0.08
USF1-205ENST00000473969 NR5A1Q13285 461 aa15.58■□□□□ 0.08
USF1-205ENST00000473969 Q4G0T1 1027 aa15.58■□□□□ 0.08
USF1-205ENST00000473969 KAT2BQ92831 832 aa15.58■□□□□ 0.08
USF1-205ENST00000473969 TNPO1Q92973 898 aaKnown RBP15.58■□□□□ 0.08
USF1-205ENST00000473969 SMARCAD1Q9H4L7 1026 aa15.58■□□□□ 0.08
USF1-205ENST00000473969 CYP3A7-CYP3A51PA0A087WV96 503 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 H3BQV1 296 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 B4GALT4O60513 344 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 GAS7O60861 476 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 GNAT1P11488 350 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 CYP3A7P24462 503 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 GJB2P29033 226 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 ACTR2P61160 394 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 KRT76Q01546 638 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 ITGB3BPQ13352 177 aaPredicted RBP15.57■□□□□ 0.08
USF1-205ENST00000473969 MIS18BP1Q6P0N0 1132 aa15.57■□□□□ 0.08
USF1-205ENST00000473969 FBXO18Q8NFZ0 1043 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms