RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CNKSR3Q6P9H4 555 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 ARNTL2Q8WYA1 636 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 ATP6V0A1Q93050 837 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 C16orf70Q9BSU1 422 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 TUT1Q9H6E5 874 aaKnown RBP13.76□□□□□ -0.21
SMPD4-217ENST00000473720 PKD2L1Q9P0L9 805 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-217ENST00000473720 TELO2Q9Y4R8 837 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 REV3LO60673 3130 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 CHD7Q9P2D1 2997 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 MEIS2O14770 477 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 FIBPO43427 364 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 BAIAP3O94812 1187 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 SMIM10L2AP0DMW4 78 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 SMIM10L2BP0DMW5 78 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 NEDD9Q14511 834 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 KRT40Q6A162 431 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 HEATR3Q7Z4Q2 680 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
SMPD4-217ENST00000473720 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-217ENST00000473720 PSTPIP2Q9H939 334 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 CHD9Q3L8U1 2897 aa13.75□□□□□ -0.21
SMPD4-217ENST00000473720 FRMPD4Q14CM0 1322 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 LCHNA4D1U4 455 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 EPOPA6NHQ4 379 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 SPATA31C2B4DYI2 1134 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 TREHO43280 583 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 STAM2O75886 525 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 CTSHP09668 335 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 HOXD8P13378 290 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-217ENST00000473720 ICAM3P32942 547 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 LIFRP42702 1097 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 TAP1Q03518 808 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 IKBKEQ14164 716 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 TRIM71Q2Q1W2 868 aaKnown RBP13.74□□□□□ -0.21
SMPD4-217ENST00000473720 TJAP1Q5JTD0 557 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-217ENST00000473720 SPRED2Q7Z698 418 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 NLRX1Q86UT6 975 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 FANCBQ8NB91 859 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 USP26Q9BXU7 913 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 RNPEPQ9H4A4 650 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 MTUS1Q9ULD2 1270 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 ATG2AQ2TAZ0 1938 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 VCANP13611 3396 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
SMPD4-217ENST00000473720 RSPH10B2B2RC85 870 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-217ENST00000473720 PARNO95453 639 aaKnown RBP13.73□□□□□ -0.21
SMPD4-217ENST00000473720 RSPH10BP0C881 870 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 SMARCA1P28370 1054 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 RBL2Q08999 1139 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 GPR20Q99678 358 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 SETD4Q9NVD3 440 aa13.73□□□□□ -0.21
SMPD4-217ENST00000473720 ABHD14A-ACY1A0A1B0GW23 586 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 SPDYE3A6NKU9 549 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 PIK3CDO00329 1044 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 LGR5O75473 907 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 CXCL10P02778 98 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 MARK3P27448 753 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 MBTPS1Q14703 1052 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 ADCK5Q3MIX3 580 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 TRAF7Q6Q0C0 670 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 SERINC5Q86VE9 423 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 DBF4BQ8NFT6 615 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 PGBD1Q96JS3 809 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-217ENST00000473720 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-217ENST00000473720 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 CUL9Q8IWT3 2517 aa13.72□□□□□ -0.21
SMPD4-217ENST00000473720 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 CNTNAP5Q8WYK1 1306 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 ATP9AO75110 1047 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-217ENST00000473720 NAPAP54920 295 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
SMPD4-217ENST00000473720 FGD1P98174 961 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 RTN1Q16799 776 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 APOA5Q6Q788 366 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMPD4-217ENST00000473720 MYOCDQ8IZQ8 938 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 GDPD5Q8WTR4 605 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 BRPF3Q9ULD4 1205 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
SMPD4-217ENST00000473720 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms