RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CXCL10P02778 98 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 AMHP03971 560 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
CKS1B-205ENST00000473344 SSTR3P32745 418 aaPredicted RBP8.06□□□□□ -1.12
CKS1B-205ENST00000473344 NT5C2P49902 561 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 PDE1AP54750 535 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 PTK7Q13308 1070 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 KIAA0753Q2KHM9 967 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 PROX2Q3B8N5 592 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 SPRED2Q7Z698 418 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 TICAM2Q86XR7 235 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 ADGRF4Q8IZF3 695 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 SYTL5Q8TDW5 730 aaPredicted RBP8.06□□□□□ -1.12
CKS1B-205ENST00000473344 KAT2BQ92831 832 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 ZFRQ96KR1 1074 aaKnown RBP8.06□□□□□ -1.12
CKS1B-205ENST00000473344 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 UBE2ZQ9H832 354 aaPredicted RBP8.06□□□□□ -1.12
CKS1B-205ENST00000473344 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 CTNNA3Q9UI47 895 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 INSL6Q9Y581 213 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 EMSYQ7Z589 1322 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 SALL3Q9BXA9 1300 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 WDFY4Q6ZS81 3184 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 LINC01553A4QN01 128 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 FAM86C2PA6NEL3 165 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 GPR37L1O60883 481 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 LGR5O75473 907 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 F2P00734 622 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 PARP1P09874 1014 aaKnown RBP8.05□□□□□ -1.12
CKS1B-205ENST00000473344 ZNF286BP0CG31 522 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 KCNA5P22460 613 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 THPOP40225 353 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 ERVK-21P61565 698 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 KCNC4Q03721 635 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 RBL2Q08999 1139 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 NMIQ13287 307 aaPredicted RBP8.05□□□□□ -1.12
CKS1B-205ENST00000473344 GPNMBQ14956 572 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 PTPROQ16827 1216 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 CSPP1Q1MSJ5 1256 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 ASPRV1Q53RT3 343 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 ZNF618Q5T7W0 954 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 KCNV1Q6PIU1 500 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 ZNF589Q86UQ0 364 aaPredicted RBP8.05□□□□□ -1.12
CKS1B-205ENST00000473344 TBC1D10CQ8IV04 446 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 MYOCDQ8IZQ8 938 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 GJD3Q8N144 294 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 PPTC7Q8NI37 304 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 TBC1D5Q92609 795 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 DHX38Q92620 1227 aaKnown RBP8.05□□□□□ -1.12
CKS1B-205ENST00000473344 EMID1Q96A84 441 aaPredicted RBP8.05□□□□□ -1.12
CKS1B-205ENST00000473344 CTAGE1Q96RT6 745 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 PXMP2Q9NR77 195 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 COL20A1Q9P218 1284 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 KIAA1468Q9P260 1216 aa8.05□□□□□ -1.12
CKS1B-205ENST00000473344 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
CKS1B-205ENST00000473344 NEDD4P46934 1319 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 TANC1Q9C0D5 1861 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 LCTP09848 1927 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 RSPH10B2B2RC85 870 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 PI4K2BG5E9Z4 385 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 SORBS3O60504 671 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 KDM4AO75164 1064 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 PPFIA4O75335 1185 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 NR3C2P08235 984 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 RSPH10BP0C881 870 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 MYCLP12524 364 aaPredicted RBP8.04□□□□□ -1.12
CKS1B-205ENST00000473344 ALADP13716 330 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 QRICH1Q2TAL8 776 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 PUS10Q3MIT2 529 aaKnown RBP8.04□□□□□ -1.12
CKS1B-205ENST00000473344 LEXMQ3ZCV2 418 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
CKS1B-205ENST00000473344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.04□□□□□ -1.12
CKS1B-205ENST00000473344 EP400NLQ6ZTU2 488 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 UIMC1Q96RL1 719 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 ZSCAN10Q96SZ4 725 aaPredicted RBP8.04□□□□□ -1.12
CKS1B-205ENST00000473344 YME1L1Q96TA2 773 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 C17orf80Q9BSJ5 609 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 UBAC1Q9BSL1 405 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 AMNQ9BXJ7 453 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 MLXIPQ9HAP2 919 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 FAM50BQ9Y247 325 aa8.04□□□□□ -1.12
CKS1B-205ENST00000473344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 C17orf102A2RUQ5 167 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 B4E1Z4 1266 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 HAS3O00219 553 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 NOP56O00567 594 aaKnown RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 UPP2O95045 317 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 GGPS1O95749 300 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 SDSP20132 328 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 ZNF200P98182 395 aaPredicted RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 TRAF1Q13077 416 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 NBR1Q14596 966 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 IMMTQ16891 758 aaKnown RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 HSDL1Q3SXM5 330 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms