RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 NCAM2O15394 837 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 PHACTR2O75167 634 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 NPTXRO95502 500 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 MT-CO1P00395 513 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 PYGMP11217 842 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 RPS6KB1P23443 525 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 GALNSP34059 522 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 CAP2P40123 477 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 KRT83P78385 493 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 GRB10Q13322 594 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 SEPT7Q16181 437 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 SLC10A5Q5PT55 438 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 GK5Q6ZS86 529 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 SV2BQ7L1I2 683 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 ARHGEF25Q86VW2 580 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 AFAP1Q8N556 730 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 KISS1RQ969F8 398 aaPredicted RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 FUBP3Q96I24 572 aaKnown RBP eCLIP6.9□□□□□ -1.3
RTF1-203ENST00000473214 SGCZQ96LD1 299 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 CCDC138Q96M89 665 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 IPO9Q96P70 1041 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 SEC62Q99442 399 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 MYLK2Q9H1R3 596 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 UNC45AQ9H3U1 944 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 ZCCHC17Q9NP64 241 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 NKIRAS2Q9NYR9 191 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 SEL1LQ9UBV2 794 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 LRCH1Q9Y2L9 728 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 RTCBQ9Y3I0 505 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 OAS3Q9Y6K5 1087 aaKnown RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 ROBO2Q9HCK4 1378 aa6.9□□□□□ -1.31
RTF1-203ENST00000473214 PRXQ9BXM0 1461 aa6.9□□□□□ -1.31
RTF1-203ENST00000473214 LOC102724428A0A0B4J2F2 783 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 ANKRD18BA2A2Z9 1011 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 FAM83GA6ND36 823 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 LRRC10BA6NIK2 292 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 TRIM75PA6NK02 468 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 KPNA6O60684 536 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 MED26O95402 600 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 LTFP02788 710 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 IMPDH2P12268 514 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 HOXD8P13378 290 aaPredicted RBP6.89□□□□□ -1.31
RTF1-203ENST00000473214 RHCEP18577 417 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 IARSP41252 1262 aaKnown RBP6.89□□□□□ -1.31
RTF1-203ENST00000473214 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
RTF1-203ENST00000473214 ID4P47928 161 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 SIK1P57059 783 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 BPIFB3P59826 476 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 RHDQ02161 417 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 PTPN14Q15678 1187 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 DDB1Q16531 1140 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 FAM209AQ5JX71 171 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 SPOCD1Q6ZMY3 1216 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 ERC1Q8IUD2 1116 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 ANKRD18AQ8IVF6 992 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 ANKRD24Q8TF21 1146 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 AIFM3Q96NN9 605 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 FAM167BQ9BTA0 163 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 MRPL9Q9BYD2 267 aaKnown RBP6.89□□□□□ -1.31
RTF1-203ENST00000473214 ABCG4Q9H172 646 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 PLEKHA5Q9HAU0 1116 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
RTF1-203ENST00000473214 C1orf112Q9NSG2 853 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 PDP2Q9P2J9 529 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 IKBKGQ9Y6K9 419 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 PLCH2O75038 1416 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 CEP170BQ9Y4F5 1589 aaPredicted RBP6.89□□□□□ -1.31
RTF1-203ENST00000473214 KIF14Q15058 1648 aa6.89□□□□□ -1.31
RTF1-203ENST00000473214 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 SUPT6HQ7KZ85 1726 aaKnown RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 REREQ9P2R6 1566 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 RRN3P2A6NIE6 340 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 DNAJC8O75937 253 aaPredicted RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 GRK2P25098 689 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 USP14P54578 494 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 FCGRTP55899 365 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 CACNB2Q08289 660 aaPredicted RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 PPFIA1Q13136 1202 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 PSMD6Q15008 389 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 TERF2Q15554 542 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 CCNG2Q16589 344 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 CWF19L2Q2TBE0 894 aaKnown RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 ISM2Q6H9L7 571 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 RUFY4Q6ZNE9 571 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 SAPCD2Q86UD0 394 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 N4BP2L2Q92802 583 aaPredicted RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 SNX21Q969T3 373 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 LRRC3Q9BY71 257 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 MRPL4Q9BYD3 311 aaKnown RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 XPO7Q9UIA9 1087 aaKnown RBP6.88□□□□□ -1.31
RTF1-203ENST00000473214 PPM1HQ9ULR3 514 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 SMC3Q9UQE7 1217 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms