RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ARMT1Q9H993 441 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 DGKBQ9Y6T7 804 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 M0R3H8 397 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 NKRFO15226 690 aaKnown RBP eCLIP3.28□□□□□ -1.88
XRN1-210ENST00000472697 AMY2AP04746 511 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 AMY2BP19961 511 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 EDNRBP24530 442 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 FPR2P25090 351 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 TM4SF4P48230 202 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 TUBP50607 506 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 ELF2Q15723 593 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.28□□□□□ -1.88
XRN1-210ENST00000472697 C3orf36Q3SXR2 165 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 DMRTC2Q8IXT2 367 aaPredicted RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 SHISA5Q8N114 240 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 TTC30BQ8N4P2 665 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 GPR161Q8N6U8 529 aaKnown RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 CHST14Q8NCH0 376 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 NPLOC4Q8TAT6 608 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 DHRS1Q96LJ7 313 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 Q96M66 194 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 CCDC138Q96M89 665 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 SENP7Q9BQF6 1050 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 FOXP3Q9BZS1 431 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 LRRC27Q9C0I9 530 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 POFUT1Q9H488 388 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 C14orf93Q9H972 538 aaKnown RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.28□□□□□ -1.88
XRN1-210ENST00000472697 GGA1Q9UJY5 639 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 SYNJ2O15056 1496 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 PBRM1Q86U86 1689 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 MROH2BQ7Z745 1585 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 IQSEC2Q5JU85 1478 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 K7ESF4 209 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 RGS9O75916 674 aaPredicted RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 SNRPBP14678 240 aaKnown RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 VEGFAP15692 232 aaPredicted RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 THBS2P35442 1172 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 YARSP54577 528 aaKnown RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 SMAD3P84022 425 aaKnown RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 CDK5R2Q13319 367 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 TUSC3Q13454 348 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 COL9A3Q14050 684 aaPredicted RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 KCTD2Q14681 263 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 TERF2Q15554 542 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 SMAD2Q15796 467 aaKnown RBP3.28□□□□□ -1.88
XRN1-210ENST00000472697 NBPF9Q3BBW0 867 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 UAP1L1Q3KQV9 507 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 ATAT1Q5SQI0 421 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 DTWD2Q8NBA8 298 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 DPF2Q92785 391 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 TNFRSF25Q93038 417 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 MPP4Q96JB8 637 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 MIPEPQ99797 713 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 CD244Q9BZW8 370 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 GRHPRQ9UBQ7 328 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 RCAN3Q9UKA8 241 aa3.28□□□□□ -1.88
XRN1-210ENST00000472697 E2F8A0AVK6 867 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 KLHL33A6NCF5 533 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 FAM229AH3BQW9 127 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 M0R082 166 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 KDM1AO60341 852 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ALX3O95076 343 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 POU2F2P09086 479 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 BMP4P12644 408 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 CNTFP26441 200 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ERVK-24P63145 666 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 GTF2H3Q13889 308 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 MLECQ14165 292 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ANO4Q32M45 955 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 BBS9Q3SYG4 887 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZC3H12BQ5HYM0 836 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 ANGEL2Q5VTE6 544 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 C20orf204Q6ZNR8 217 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 UBE2R2Q712K3 238 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 RTN4RL1Q86UN2 441 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 HID1Q8IV36 788 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZNF417Q8TAU3 575 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 RCC1LQ96I51 464 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 TNIP3Q96KP6 325 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZNF587Q96SQ5 575 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 CDC5LQ99459 802 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 MENTQ9BUN1 341 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZMAT4Q9H898 229 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 NMRK2Q9NPI5 230 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 DNAJC28Q9NX36 388 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 SWAP70Q9UH65 585 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 PNMA8BQ9ULN7 279 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 GIT1Q9Y2X7 761 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ANO9A1A5B4 782 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 EPB41L2O43491 1005 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 RNGTTO60942 597 aaKnown RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZKSCAN1P17029 563 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 TNFSF4P23510 183 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ADD2P35612 726 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 CABP4P57796 275 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 ZBED6P86452 979 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 KIF23Q02241 960 aaPredicted RBP3.27□□□□□ -1.89
XRN1-210ENST00000472697 KCNMA1Q12791 1236 aa3.27□□□□□ -1.89
XRN1-210ENST00000472697 MAP4K2Q12851 820 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms