RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MC3RP41968 323 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 DLG4P78352 724 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 LACTBP83111 547 aaPredicted RBP8.18□□□□□ -1.1
CLK1-209ENST00000472679 TUSC3Q13454 348 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 PIK3R6Q5UE93 754 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 DDX53Q86TM3 631 aaKnown RBP8.18□□□□□ -1.1
CLK1-209ENST00000472679 IGDCC3Q8IVU1 814 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 MZB1Q8WU39 189 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 MTFR1LQ9H019 292 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 SLKQ9H2G2 1235 aaPredicted RBP8.18□□□□□ -1.1
CLK1-209ENST00000472679 SBNO2Q9Y2G9 1366 aa8.18□□□□□ -1.1
CLK1-209ENST00000472679 B4E1Z4 1266 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 CLSTN1O94985 981 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 MYCLP1P12525 358 aaPredicted RBP8.17□□□□□ -1.1
CLK1-209ENST00000472679 GRIN1Q05586 938 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 PCBP1Q15365 356 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLK1-209ENST00000472679 CFAP100Q494V2 611 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 FSTL4Q6MZW2 842 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 AMIGO3Q86WK7 504 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 MIB1Q86YT6 1006 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 FAM26EQ8N5C1 309 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 PHOSPHO1Q8TCT1 267 aa8.17□□□□□ -1.1
CLK1-209ENST00000472679 GSG1L2A8MUP6 293 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 TRAF5O00463 557 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 MAFKO60675 156 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 KPNA6O60684 536 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 NPTXRO95502 500 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 STAT5AP42229 794 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 MASP1P48740 699 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 MECP2P51608 486 aaKnown RBP8.16□□□□□ -1.1
CLK1-209ENST00000472679 NEK4P51957 841 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 UBE2R2Q712K3 238 aaPredicted RBP8.16□□□□□ -1.1
CLK1-209ENST00000472679 KCTD1Q719H9 257 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 POU5F2Q8N7G0 328 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 SYT3Q9BQG1 590 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.16□□□□□ -1.1
CLK1-209ENST00000472679 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
CLK1-209ENST00000472679 N4BP3O15049 544 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 PDE8AO60658 829 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 POU3F2P20265 443 aaPredicted RBP8.15□□□□□ -1.1
CLK1-209ENST00000472679 EPHA5P54756 1037 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 ETV3LQ6ZN32 361 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 THNSL2Q86YJ6 484 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 FAM126BQ8IXS8 530 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 WNK4Q96J92 1243 aa8.15□□□□□ -1.1
CLK1-209ENST00000472679 SHROOM4Q9ULL8 1493 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 CBX4O00257 560 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 BUB1BO60566 1050 aaPredicted RBP8.14□□□□□ -1.11
CLK1-209ENST00000472679 C8BP07358 591 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 NCAM1P13591 858 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 IGFBP6P24592 240 aaPredicted RBP8.14□□□□□ -1.11
CLK1-209ENST00000472679 FLT3P36888 993 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 SEC23AQ15436 765 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 SEPT7Q16181 437 aaKnown RBP8.14□□□□□ -1.11
CLK1-209ENST00000472679 SKOR2Q2VWA4 1001 aaPredicted RBP8.14□□□□□ -1.11
CLK1-209ENST00000472679 HHIPL2Q6UWX4 724 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.14□□□□□ -1.11
CLK1-209ENST00000472679 FAM177A1Q8N128 213 aaPredicted RBP8.14□□□□□ -1.11
CLK1-209ENST00000472679 C2orf69Q8N8R5 385 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 CPA5Q8WXQ8 436 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 RNF38Q9H0F5 515 aa8.14□□□□□ -1.11
CLK1-209ENST00000472679 FAM90A27PA6NNH2 459 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 ACOT7O00154 380 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 LRG1P02750 347 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 TMEM253P0C7T8 217 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 C1QTNF9P0C862 333 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 MED14OSP0DP75 135 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 GLDCP23378 1020 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 CACNB2Q08289 660 aaPredicted RBP8.13□□□□□ -1.11
CLK1-209ENST00000472679 TARBP2Q15633 366 aaKnown RBP8.13□□□□□ -1.11
CLK1-209ENST00000472679 CR1LQ2VPA4 569 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 TAF7LQ5H9L4 462 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 CPZQ66K79 652 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 PKN3Q6P5Z2 889 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 ATG14Q6ZNE5 492 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 NOSTRINQ8IVI9 506 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 TRIM48Q8IWZ4 208 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 TMEFF1Q8IYR6 380 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 DTLQ9NZJ0 730 aa8.13□□□□□ -1.11
CLK1-209ENST00000472679 ZBTB48P10074 688 aaPredicted RBP8.12□□□□□ -1.11
CLK1-209ENST00000472679 LIMS1P48059 325 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 FIGNQ5HY92 759 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 CD300LDQ6UXZ3 194 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 OTOP1Q7RTM1 612 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 NLGN4XQ8N0W4 816 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 UBR7Q8N806 425 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 CHST14Q8NCH0 376 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 TTLL11Q8NHH1 800 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 SMARCC2Q8TAQ2 1214 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 TOE1Q96GM8 510 aaKnown RBP8.12□□□□□ -1.11
CLK1-209ENST00000472679 YIPF4Q9BSR8 244 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 PDGFDQ9GZP0 370 aaPredicted RBP8.12□□□□□ -1.11
CLK1-209ENST00000472679 RBPJLQ9UBG7 517 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 WASF3Q9UPY6 502 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 NUB1Q9Y5A7 615 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 ATP23Q9Y6H3 246 aa8.12□□□□□ -1.11
CLK1-209ENST00000472679 PTPDC1A2A3K4 754 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms