RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 UMODL1Q5DID0 1318 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 H3BRB1 525 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 PITPNM1O00562 1244 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 CPLX1O14810 134 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 SMAD3P84022 425 aaKnown RBP19.49■□□□□ 0.71
COMMD3-210ENST00000472610 GDF6Q6KF10 455 aaPredicted RBP19.49■□□□□ 0.71
COMMD3-210ENST00000472610 CPLX2Q6PUV4 134 aaKnown RBP19.49■□□□□ 0.71
COMMD3-210ENST00000472610 TRIM22Q8IYM9 498 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 CCDC148Q8NFR7 591 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 PPP1R13LQ8WUF5 828 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 GPR20Q99678 358 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 MXRA8Q9BRK3 442 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 SLC26A6Q9BXS9 759 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 WNT8AQ9H1J5 351 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 TUT1Q9H6E5 874 aaKnown RBP19.49■□□□□ 0.71
COMMD3-210ENST00000472610 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
COMMD3-210ENST00000472610 NCOA5Q9HCD5 579 aaKnown RBP19.49■□□□□ 0.71
COMMD3-210ENST00000472610 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
COMMD3-210ENST00000472610 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
COMMD3-210ENST00000472610 FGBP02675 491 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 LGALS2P05162 132 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 PFKMP08237 780 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 SREBF1P36956 1147 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 SSRP1Q08945 709 aaKnown RBP19.48■□□□□ 0.71
COMMD3-210ENST00000472610 FAM109BQ6ICB4 259 aaPredicted RBP19.48■□□□□ 0.71
COMMD3-210ENST00000472610 ZNF365Q70YC5 407 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 CAGE1Q8TC20 777 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 MTIF3Q9H2K0 278 aaKnown RBP19.48■□□□□ 0.71
COMMD3-210ENST00000472610 SH3GLB2Q9NR46 395 aa19.48■□□□□ 0.71
COMMD3-210ENST00000472610 ATP9AO75110 1047 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 ACRP10323 421 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 KCNA2P16389 499 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 RFC2P35250 354 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 ANKRD1Q15327 319 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 SCLYQ96I15 445 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 PGBD1Q96JS3 809 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 TMEM260Q9NX78 707 aa19.47■□□□□ 0.71
COMMD3-210ENST00000472610 ZNF215Q9UL58 517 aaPredicted RBP19.47■□□□□ 0.71
COMMD3-210ENST00000472610 ZNF76P36508 570 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 PTK7Q13308 1070 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 CEP55Q53EZ4 464 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 RASIP1Q5U651 963 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 JAKMIP3Q5VZ66 844 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 REXO1Q8N1G1 1221 aaKnown RBP19.46■□□□□ 0.71
COMMD3-210ENST00000472610 DEFB123Q8N688 67 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 AFAP1L1Q8TED9 768 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 SEPT1Q8WYJ6 367 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 HERVK_113Q902F9 699 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 IL17RAQ96F46 866 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 LARP6Q9BRS8 491 aaKnown RBP19.46■□□□□ 0.71
COMMD3-210ENST00000472610 KCNH7Q9NS40 1196 aa19.46■□□□□ 0.71
COMMD3-210ENST00000472610 TRIP12Q14669 1992 aaPredicted RBP19.45■□□□□ 0.7
COMMD3-210ENST00000472610 DEXIO95424 95 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 PARNO95453 639 aaKnown RBP19.45■□□□□ 0.7
COMMD3-210ENST00000472610 IQCF3P0C7M6 154 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 ARHGAP4P98171 946 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 RBL2Q08999 1139 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 STK3Q13188 491 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 NIPA1Q7RTP0 329 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
COMMD3-210ENST00000472610 CTAGE1Q96RT6 745 aa19.45■□□□□ 0.7
COMMD3-210ENST00000472610 C17orf102A2RUQ5 167 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 MEIS1O00470 390 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 CDKL5O76039 1030 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 CYP3A4P08684 503 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 GNAT1P11488 350 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 TCF7P36402 384 aaPredicted RBP19.44■□□□□ 0.7
COMMD3-210ENST00000472610 SP4Q02446 784 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 UTP14CQ5TAP6 766 aaKnown RBP19.44■□□□□ 0.7
COMMD3-210ENST00000472610 ZNF697Q5TEC3 545 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 SDF4Q9BRK5 362 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 SLKQ9H2G2 1235 aaPredicted RBP19.44■□□□□ 0.7
COMMD3-210ENST00000472610 NFASCO94856 1347 aa19.44■□□□□ 0.7
COMMD3-210ENST00000472610 TANC1Q9C0D5 1861 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 PPFIA3O75145 1194 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 ACTN1P12814 892 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 NLRP5P59047 1200 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 CYP2W1Q8TAV3 490 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 CRYGNQ8WXF5 182 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 JPH1Q9HDC5 661 aaPredicted RBP19.43■□□□□ 0.7
COMMD3-210ENST00000472610 PKD2L1Q9P0L9 805 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
COMMD3-210ENST00000472610 GSTTP1A0A1W2PQM5 241 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 PFKFB2O60825 505 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 SMIM10L2AP0DMW4 78 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 SMIM10L2BP0DMW5 78 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 ARP10275 920 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 SELPP16109 830 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 HOXC8P31273 242 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 OTOP2Q7RTS6 562 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 DEFB128Q7Z7B8 93 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 DHX38Q92620 1227 aaKnown RBP19.42■□□□□ 0.7
COMMD3-210ENST00000472610 ATP6V0A1Q93050 837 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 RNPEPQ9H4A4 650 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 SMARCAD1Q9H4L7 1026 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 MTMR10Q9NXD2 777 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 TPCN1Q9ULQ1 816 aa19.42■□□□□ 0.7
COMMD3-210ENST00000472610 SCN5AQ14524 2016 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms