RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 PDRG1Q9NUG6 133 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 ELP1O95163 1332 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 PTPRSQ13332 1948 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 PALM3A6NDB9 673 aaPredicted RBP10.57□□□□□ -0.72
SMC4-213ENST00000472282 GOLGA8AA7E2F4 631 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 GOLGA8BA8MQT2 603 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 ARVCFO00192 962 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 ZBTB43O43298 467 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 DHX16O60231 1041 aaKnown RBP10.57□□□□□ -0.72
SMC4-213ENST00000472282 CALM1P0DP23 149 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 CALM2P0DP24 149 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 CALM3P0DP25 149 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 CD46P15529 392 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 RAG1P15918 1043 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 KIF5BP33176 963 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 PSMC6P62333 389 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 RPS6P62753 249 aaKnown RBP10.57□□□□□ -0.72
SMC4-213ENST00000472282 CDC37Q16543 378 aaPredicted RBP10.57□□□□□ -0.72
SMC4-213ENST00000472282 SLC35G1Q2M3R5 365 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 SYNE3Q6ZMZ3 975 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 CRIPAKQ8N1N5 446 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 FBXL16Q8N461 479 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 GUCD1Q96NT3 240 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 MAP3K14Q99558 947 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 KIF2CQ99661 725 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 VTA1Q9NP79 307 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 PRDM9Q9NQV7 894 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 COL20A1Q9P218 1284 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 UMODL1Q5DID0 1318 aa10.57□□□□□ -0.72
SMC4-213ENST00000472282 NID2Q14112 1375 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 A0A0U1RQG5 324 aaPredicted RBP10.56□□□□□ -0.72
SMC4-213ENST00000472282 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 CD4P01730 458 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 NEK4P51957 841 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 AK2P54819 239 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 USP46P62068 366 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 FSCN1Q16658 493 aaKnown RBP10.56□□□□□ -0.72
SMC4-213ENST00000472282 RTN1Q16799 776 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 CTC1Q2NKJ3 1217 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 IQSEC1Q6DN90 963 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 C16orf59Q7L2K0 433 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 SLC43A3Q8NBI5 491 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 PPP1R13LQ8WUF5 828 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 COPS5Q92905 334 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 PPP1R12CQ9BZL4 782 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 JMJD4Q9H9V9 463 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 SPC25Q9HBM1 224 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
SMC4-213ENST00000472282 RBM47A0AV96 593 aaKnown RBP10.55□□□□□ -0.72
SMC4-213ENST00000472282 TTC24A2A3L6 582 aaPredicted RBP10.55□□□□□ -0.72
SMC4-213ENST00000472282 RBAK-RBAKDNI3L0D1 243 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 CYTH3O43739 400 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 ARIH2O95376 493 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 TIMP1P01033 207 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 AVPP01185 164 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 EDNRBP24530 442 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 METAP2P50579 478 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMC4-213ENST00000472282 RCAN1P53805 252 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 FPGSQ05932 587 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 DUSP28Q4G0W2 176 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 HOMER1Q86YM7 354 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
SMC4-213ENST00000472282 FANCBQ8NB91 859 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 TAAR1Q96RJ0 339 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.722e-9■■■■■ 123.9
SMC4-213ENST00000472282 WDR11Q9BZH6 1224 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 AP5M1Q9H0R1 490 aa10.55□□□□□ -0.72
SMC4-213ENST00000472282 ADD3Q9UEY8 706 aaKnown RBP10.55□□□□□ -0.72
SMC4-213ENST00000472282 OPLAHO14841 1288 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 AXIN1O15169 862 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 B4GALT4O60513 344 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 PPP1R11O60927 126 aaPredicted RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 ACRP10323 421 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 CSF2RAP15509 400 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 CDC27P30260 824 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 CYP2C18P33260 490 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 GNAQP50148 359 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 EVCP57679 992 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 ITGA7Q13683 1181 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 FAM109BQ6ICB4 259 aaPredicted RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 MFSD5Q6N075 450 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 SRBD1Q8N5C6 995 aaKnown RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 SYTL5Q8TDW5 730 aaPredicted RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 PIBF1Q8WXW3 757 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms