RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
GGPS1-204ENST00000471812 GGPS1O95749 300 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 GH1P01241 217 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 CENPBP07199 599 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-204ENST00000471812 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-204ENST00000471812 CSF2RAP15509 400 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 RAG1P15918 1043 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 CCL23P55773 120 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 KRT32Q14532 448 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 MYSM1Q5VVJ2 828 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 CYP2W1Q8TAV3 490 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 SCLYQ96I15 445 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 AIFM3Q96NN9 605 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 LBHD1Q9BQE6 289 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-204ENST00000471812 NOC4LQ9BVI4 516 aaKnown RBP10.87□□□□□ -0.67
GGPS1-204ENST00000471812 ALDH8A1Q9H2A2 487 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-204ENST00000471812 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 PKD2L1Q9P0L9 805 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 NID2Q14112 1375 aa10.87□□□□□ -0.67
GGPS1-204ENST00000471812 SIP14410 1827 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 CDH23Q9H251 3354 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 GRXCR1A8MXD5 290 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 EDIL3O43854 480 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 REC8O95072 547 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 LARGE1O95461 756 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 TIMP1P01033 207 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 CALM1P0DP23 149 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 CALM2P0DP24 149 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 CALM3P0DP25 149 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 CCND2P30279 289 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 GNAQP50148 359 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 METAP2P50579 478 aaKnown RBP eCLIP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 TCTN1Q2MV58 587 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 GDF6Q6KF10 455 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 SMARCC2Q8TAQ2 1214 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 RASGRP4Q8TDF6 673 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 DHX38Q92620 1227 aaKnown RBP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 INPP4AQ96PE3 977 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
GGPS1-204ENST00000471812 SEC63Q9UGP8 760 aaKnown RBP10.86□□□□□ -0.67
GGPS1-204ENST00000471812 COL6A3P12111 3177 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 SPATA31C2B4DYI2 1134 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 PIK3CDO00329 1044 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 ITGB5P18084 799 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 CPT1AP50416 773 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 NAPAP54920 295 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 SP4Q02446 784 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 STK3Q13188 491 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 CELF3Q5SZQ8 465 aaKnown RBP10.85□□□□□ -0.67
GGPS1-204ENST00000471812 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 CYFIP1Q7L576 1253 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 ZNF710Q8N1W2 664 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
GGPS1-204ENST00000471812 PRKAG2Q9UGJ0 569 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 KAT6AQ92794 2004 aa10.85□□□□□ -0.67
GGPS1-204ENST00000471812 LOXHD1Q8IVV2 1947 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 A0A1W2PPC1 479 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 HAS3O00219 553 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 NKRFO15226 690 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGPS1-204ENST00000471812 HOXD8P13378 290 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-204ENST00000471812 PSEN2P49810 448 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 FGD1P98174 961 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 FPGSQ05932 587 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 GPNMBQ14956 572 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 LRIT3Q3SXY7 679 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 PCNX4Q63HM2 1172 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 MFSD5Q6N075 450 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-204ENST00000471812 ZBTB10Q96DT7 871 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 FAM161BQ96MY7 647 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 C16orf70Q9BSU1 422 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 MAF1Q9H063 256 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 GJB4Q9NTQ9 266 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
GGPS1-204ENST00000471812 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
GGPS1-204ENST00000471812 SMCO2A6NFE2 343 aa10.83□□□□□ -0.68
GGPS1-204ENST00000471812 ZEB2O60315 1214 aa10.83□□□□□ -0.68
GGPS1-204ENST00000471812 CABYRO75952 493 aa10.83□□□□□ -0.68
GGPS1-204ENST00000471812 ARP10275 920 aa10.83□□□□□ -0.68
GGPS1-204ENST00000471812 KCNA2P16389 499 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms