RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SV2BQ7L1I2 683 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 ZSCAN29Q8IWY8 852 aaPredicted RBP7.17□□□□□ -1.26
SPEN-204ENST00000471538 LRRN4CLQ8ND94 238 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 ANKRD20A12PQ8NF67 263 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 SNX29Q8TEQ0 813 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 CCDC47Q96A33 483 aaKnown RBP7.17□□□□□ -1.26
SPEN-204ENST00000471538 TRIM47Q96LD4 638 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 PSMD1Q99460 953 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 DESI2Q9BSY9 194 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 SRRTQ9BXP5 876 aaKnown RBP7.17□□□□□ -1.26
SPEN-204ENST00000471538 ANO3Q9BYT9 981 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 RAB34Q9BZG1 259 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 TTYH3Q9C0H2 523 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 SEMA6BQ9H3T3 888 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 DNAI1Q9UI46 699 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 RBBP6Q7Z6E9 1792 aaKnown RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 A0A0U1RQJ8 604 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 BICDL2A1A5D9 508 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 NKRFO15226 690 aaKnown RBP eCLIP7.16□□□□□ -1.26
SPEN-204ENST00000471538 C21orf2O43822 256 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 GH2P01242 217 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 VIL1P09327 827 aaKnown RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 CCDC175P0C221 793 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 RGS19P49795 217 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 SPIRE1Q08AE8 756 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 Q4G0T1 1027 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 MIIPQ5JXC2 388 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 SYDE2Q5VT97 1194 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 KRT79Q5XKE5 535 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 MCTP2Q6DN12 878 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 TMTC1Q8IUR5 882 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 GUF1Q8N442 669 aaKnown RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 PDCL2Q8N4E4 241 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 CSGALNACT2Q8N6G5 542 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 ETNPPLQ8TBG4 499 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 CPLX3Q8WVH0 158 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 ATRIPQ8WXE1 791 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 HPS3Q969F9 1004 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 ZDHHC16Q969W1 377 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 LENG9Q96B70 501 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 DNAJC19Q96DA6 116 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 CNOT6LQ96LI5 555 aaKnown RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 WDR24Q96S15 920 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 NUP88Q99567 741 aaPredicted RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 DNAJC7Q99615 494 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 CCDC94Q9BW85 323 aaPredicted RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 AMNQ9BXJ7 453 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 PGAP2Q9UHJ9 254 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 HERC5Q9UII4 1024 aaKnown RBP7.16□□□□□ -1.26
SPEN-204ENST00000471538 PCDHA1Q9Y5I3 950 aa7.16□□□□□ -1.26
SPEN-204ENST00000471538 ABCB11O95342 1321 aa7.15□□□□□ -1.26
SPEN-204ENST00000471538 KDM3AQ9Y4C1 1321 aa7.15□□□□□ -1.26
SPEN-204ENST00000471538 TTC26A0AVF1 554 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 FRMD3A2A2Y4 597 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 B4DLN1 442 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 PIK3CDO00329 1044 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 TBX3O15119 743 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 TPM1P09493 284 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 BMP3P12645 472 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 CIITAP33076 1130 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 SREBF1P36956 1147 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 ARHGAP25P42331 645 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 DNM2P50570 870 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 MAP3K9P80192 1104 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 ARHGAP4P98171 946 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 UBXN1Q04323 297 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 PSMD2Q13200 908 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 MEA1Q16626 185 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 ZCWPW2Q504Y3 356 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 FIGNQ5HY92 759 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 KIAA1755Q5JYT7 1200 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 RBM26Q5T8P6 1007 aaKnown RBP7.15□□□□□ -1.27
SPEN-204ENST00000471538 LRRC55Q6ZSA7 311 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 TEX2Q8IWB9 1127 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 FAM114A1Q8IWE2 563 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 MTMR14Q8NCE2 650 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 FAM151AQ8WW52 585 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 DDX12PQ92771 950 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 GJA10Q969M2 543 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 ZBED3Q96IU2 234 aaPredicted RBP7.15□□□□□ -1.27
SPEN-204ENST00000471538 ERGIC2Q96RQ1 377 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 CSRNP1Q96S65 589 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 TUBGCP2Q9BSJ2 902 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 LRRC27Q9C0I9 530 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 SLC39A2Q9NP94 309 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 CGNQ9P2M7 1197 aaKnown RBP7.15□□□□□ -1.27
SPEN-204ENST00000471538 ZNF70Q9UC06 446 aaPredicted RBP7.15□□□□□ -1.27
SPEN-204ENST00000471538 CAPN11Q9UMQ6 739 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 PCDHA12Q9UN75 941 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 TMX2Q9Y320 296 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.27
SPEN-204ENST00000471538 PCDHA2Q9Y5H9 948 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 MRFAP1Q9Y605 127 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 THSD7BQ9C0I4 1608 aa7.15□□□□□ -1.27
SPEN-204ENST00000471538 SCN4AP35499 1836 aa7.14□□□□□ -1.27
SPEN-204ENST00000471538 A0A1W2PQJ5 194 aa7.14□□□□□ -1.27
SPEN-204ENST00000471538 PSMD14O00487 310 aa7.14□□□□□ -1.27
SPEN-204ENST00000471538 TADA3O75528 432 aa7.14□□□□□ -1.27
SPEN-204ENST00000471538 FOSP01100 380 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms