RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 YBX2Q9Y2T7 364 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 LTN1O94822 1766 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 ADAMTS13Q76LX8 1427 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 SBNO1A3KN83 1393 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 CNTNAP1P78357 1384 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 PLEKHG1Q9ULL1 1385 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 IGSF1Q8N6C5 1336 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 WDR33Q9C0J8 1336 aaKnown RBP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 PRR36Q9H6K5 1346 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 SLITRK5O94991 958 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 GNAI2P04899 355 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 MCCP23508 829 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 HMGN5P82970 282 aaKnown RBP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 XPCQ01831 940 aaPredicted RBP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 SAFB2Q14151 953 aaKnown RBP eCLIP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 INPP5AQ14642 412 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 RTP5Q14D33 572 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 TTBK2Q6IQ55 1244 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 SASS6Q6UVJ0 657 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 ZGPATQ8N5A5 531 aaKnown RBP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 OTUD7AQ8TE49 926 aaPredicted RBP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 GAL3ST3Q96A11 431 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 SYAP1Q96A49 352 aaPredicted RBP4.32□□□□□ -1.72
CSMD2-208ENST00000471438 TTC14Q96N46 770 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 MEIS3Q99687 375 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 FUCA2Q9BTY2 467 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 TM6SF1Q9BZW5 370 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 WNT10AQ9GZT5 417 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 IGSF5Q9NSI5 407 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 SPTLC3Q9NUV7 552 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 RNF19AQ9NV58 838 aa4.32□□□□□ -1.72
CSMD2-208ENST00000471438 KCPQ6ZWJ8 1503 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 NPHP3Q7Z494 1330 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 LAMA4Q16363 1823 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 K7ESM1 405 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 CBX7O95931 251 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 TPM3P06753 285 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 HOXB7P09629 217 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 MX1P20591 662 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 FBLN1P23142 703 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 GNA15P30679 374 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 NEK4P51957 841 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 PTPN11Q06124 597 aaPredicted RBP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 CCDC85BQ15834 202 aaPredicted RBP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 TIGD5Q53EQ6 642 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 WIPI1Q5MNZ9 446 aaPredicted RBP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 SULT6B1Q6IMI4 303 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 LRFN4Q6PJG9 635 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 DNAJC14Q6Y2X3 702 aaPredicted RBP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 SND1Q7KZF4 910 aaKnown RBP eCLIP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 CREG2Q8IUH2 290 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 PLPPR2Q96GM1 343 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 COX4I2Q96KJ9 171 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 ORAI2Q96SN7 254 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 MIPEPQ99797 713 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 CHMP4AQ9BY43 222 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 LRRCC1Q9C099 1032 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 USP25Q9UHP3 1055 aa4.31□□□□□ -1.72
CSMD2-208ENST00000471438 CNOT11Q9UKZ1 510 aaKnown RBP4.31□□□□□ -1.72
CSMD2-208ENST00000471438 OVOS2A0A0G2JMS6 1433 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 NCAPD2Q15021 1401 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 FLT4P35916 1363 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 CEMIPQ8WUJ3 1361 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 COL24A1Q17RW2 1714 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SPATA31A5Q5VU36 1347 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 TTC41PQ6P2S7 1318 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 CCDC171Q6TFL3 1326 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SPATA31A7Q8IWB4 1347 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SYCE3A1L190 88 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 FITM1A5D6W6 292 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 ELL2O00472 640 aaPredicted RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 PLSCR1O15162 318 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 MATN3O15232 486 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SGSM2O43147 1006 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SMARCA5O60264 1052 aaPredicted RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 CILPO75339 1184 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 CAP2P40123 477 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 RPS26P62854 115 aaKnown RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 MTX1Q13505 466 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 DCTN1Q14203 1278 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SYCP1Q15431 976 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 CCDC183Q5T5S1 534 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 CCDC30Q5VVM6 783 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 LETMD1Q6P1Q0 360 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 G2E3Q7L622 706 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 TICAM2Q86XR7 235 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 SMAP1Q8IYB5 467 aaPredicted RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 PIBF1Q8WXW3 757 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 ZSCAN31Q96LW9 406 aaPredicted RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 USP44Q9H0E7 712 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 MBD1Q9UIS9 605 aaPredicted RBP4.3□□□□□ -1.72
CSMD2-208ENST00000471438 PRDM4Q9UKN5 801 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 TACC3Q9Y6A5 838 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 RGPD2P0DJD1 1756 aa4.3□□□□□ -1.72
CSMD2-208ENST00000471438 ANKARQ7Z5J8 1434 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 PKD1L3Q7Z443 1732 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms