RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 RRP36Q96EU6 259 aaKnown RBP17.65■□□□□ 0.42
CNOT3-206ENST00000471126 PURBQ96QR8 312 aaKnown RBP17.65■□□□□ 0.42
CNOT3-206ENST00000471126 COL20A1Q9P218 1284 aa17.65■□□□□ 0.42
CNOT3-206ENST00000471126 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
CNOT3-206ENST00000471126 PRKAG3Q9UGI9 489 aa17.65■□□□□ 0.42
CNOT3-206ENST00000471126 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
CNOT3-206ENST00000471126 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 ASB14A6NK59 587 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 ZEB2O60315 1214 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 SUPT20HL2P0C7V6 817 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 RFC2P35250 354 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 ALDH5A1P51649 535 aaPredicted RBP17.64■□□□□ 0.41
CNOT3-206ENST00000471126 FGD1P98174 961 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 TLK2Q86UE8 772 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 ZNF274Q96GC6 653 aaPredicted RBP17.64■□□□□ 0.41
CNOT3-206ENST00000471126 KIF2CQ99661 725 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 PRRX2Q99811 253 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 AP5M1Q9H0R1 490 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 MUTYHQ9UIF7 546 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 ZDBF2Q9HCK1 2354 aa17.64■□□□□ 0.41
CNOT3-206ENST00000471126 CCDC196A0A1B0GTZ2 297 aa17.63■□□□□ 0.41
CNOT3-206ENST00000471126 RBM25P49756 843 aaKnown RBP17.63■□□□□ 0.41
CNOT3-206ENST00000471126 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
CNOT3-206ENST00000471126 ERVK-21P61565 698 aa17.63■□□□□ 0.41
CNOT3-206ENST00000471126 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
CNOT3-206ENST00000471126 ADHFE1Q8IWW8 467 aa17.63■□□□□ 0.41
CNOT3-206ENST00000471126 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
CNOT3-206ENST00000471126 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
CNOT3-206ENST00000471126 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 IQCF3P0C7M6 154 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 CALML3P27482 149 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
CNOT3-206ENST00000471126 KCNJ6P48051 423 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
CNOT3-206ENST00000471126 BMP8AQ7Z5Y6 402 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 SEC63Q9UGP8 760 aaKnown RBP17.62■□□□□ 0.41
CNOT3-206ENST00000471126 FAM50BQ9Y247 325 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 FRMPD4Q14CM0 1322 aa17.62■□□□□ 0.41
CNOT3-206ENST00000471126 hCG_1984214I3L0E3 225 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 BAIAP3O94812 1187 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 IFNAR1P17181 557 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 SMPD1P17405 629 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 EP400NLQ6ZTU2 488 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 ERMP1Q7Z2K6 904 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 ZNF713Q8N859 430 aaPredicted RBP17.61■□□□□ 0.41
CNOT3-206ENST00000471126 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 PBXIP1Q96AQ6 731 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 VTA1Q9NP79 307 aa17.61■□□□□ 0.41
CNOT3-206ENST00000471126 RBM47A0AV96 593 aaKnown RBP17.6■□□□□ 0.41
CNOT3-206ENST00000471126 LINC01553A4QN01 128 aa17.6■□□□□ 0.41
CNOT3-206ENST00000471126 TAPT1Q6NXT6 567 aa17.6■□□□□ 0.41
CNOT3-206ENST00000471126 PPP1R18Q6NYC8 613 aa17.6■□□□□ 0.41
CNOT3-206ENST00000471126 EDAQ92838 391 aa17.6■□□□□ 0.41
CNOT3-206ENST00000471126 TAAR1Q96RJ0 339 aa17.6■□□□□ 0.41
CNOT3-206ENST00000471126 IWS1Q96ST2 819 aa17.6■□□□□ 0.41
CNOT3-206ENST00000471126 DDX49Q9Y6V7 483 aaKnown RBP17.6■□□□□ 0.41
CNOT3-206ENST00000471126 COL4A4P53420 1690 aaPredicted RBP17.6■□□□□ 0.41
CNOT3-206ENST00000471126 MEIS2O14770 477 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 PRPF3O43395 683 aaKnown RBP17.59■□□□□ 0.41
CNOT3-206ENST00000471126 AK2P54819 239 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 WDR5P61964 334 aaKnown RBP17.59■□□□□ 0.41
CNOT3-206ENST00000471126 ANKRD1Q15327 319 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 TMEM63BQ5T3F8 832 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 TYW1BQ6NUM6 668 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
CNOT3-206ENST00000471126 RAD9AQ99638 391 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 RNF26Q9BY78 433 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-206ENST00000471126 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
CNOT3-206ENST00000471126 ZFHX2Q9C0A1 2572 aaPredicted RBP17.58■□□□□ 0.41
CNOT3-206ENST00000471126 C5orf42Q9H799 3197 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 TMEM221A6NGB7 291 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 GCOM1H8Y6P7 765 aaPredicted RBP17.58■□□□□ 0.4
CNOT3-206ENST00000471126 M0R296 226 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 CFBP00751 764 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 POLR2MP0CAP2 368 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 DEFB103AP81534 67 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 PKN1Q16512 942 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
CNOT3-206ENST00000471126 RNF135Q8IUD6 432 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.4
CNOT3-206ENST00000471126 PIBF1Q8WXW3 757 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 ATOH1Q92858 354 aaPredicted RBP17.58■□□□□ 0.4
CNOT3-206ENST00000471126 RMDN3Q96TC7 470 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 C22orf23Q9BZE7 217 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 PXMP2Q9NR77 195 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 PDGFCQ9NRA1 345 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 BARHL2Q9NY43 387 aa17.58■□□□□ 0.4
CNOT3-206ENST00000471126 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
CNOT3-206ENST00000471126 STXBP3O00186 592 aa17.57■□□□□ 0.4
CNOT3-206ENST00000471126 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
CNOT3-206ENST00000471126 PFKFB2O60825 505 aa17.57■□□□□ 0.4
CNOT3-206ENST00000471126 PABPC5Q96DU9 382 aaKnown RBP17.57■□□□□ 0.4
CNOT3-206ENST00000471126 MRPL38Q96DV4 380 aaKnown RBP17.57■□□□□ 0.4
CNOT3-206ENST00000471126 MPHOSPH6Q99547 160 aaKnown RBP17.57■□□□□ 0.4
CNOT3-206ENST00000471126 PDCD2LQ9BRP1 358 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms