RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 POLLQ9UGP5 575 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 COL11A2P13942 1736 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-208ENST00000470994 RFXAPO00287 272 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 GIPC1O14908 333 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 ECE2O60344 883 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 UFL1O94874 794 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 ESR1P03372 595 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 HOXB7P09629 217 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
GPNMB-208ENST00000470994 MAP2K2P36507 400 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 ETV3P41162 512 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 HUNKP57058 714 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 ERVFC1P60507 584 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 TNK2Q07912 1038 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 ENOX2Q16206 610 aaKnown RBP7.43□□□□□ -1.22
GPNMB-208ENST00000470994 PRAMEF13Q5VWM6 474 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 KRT26Q7Z3Y9 468 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 SAPCD2Q86UD0 394 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 BAHD1Q8TBE0 780 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-208ENST00000470994 C20orf173Q96LM9 149 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 RNF32Q9H0A6 362 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 PHAXQ9H814 394 aaKnown RBP7.43□□□□□ -1.22
GPNMB-208ENST00000470994 RIC1Q4ADV7 1423 aa7.43□□□□□ -1.22
GPNMB-208ENST00000470994 PEX10O60683 326 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 DDX58O95786 925 aaKnown RBP7.42□□□□□ -1.22
GPNMB-208ENST00000470994 BMP7P18075 431 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 GNAI1P63096 354 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 DLG4P78352 724 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 PLCB3Q01970 1234 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 CALD1Q05682 793 aaKnown RBP7.42□□□□□ -1.22
GPNMB-208ENST00000470994 CCDC152Q4G0S7 254 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-208ENST00000470994 TCERG1LQ5VWI1 586 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 DBX2Q6ZNG2 339 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 C2orf69Q8N8R5 385 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 ZBTB38Q8NAP3 1195 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-208ENST00000470994 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 TBC1D16Q8TBP0 767 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 DPF2Q92785 391 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 PGAP2Q9UHJ9 254 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 DCTN4Q9UJW0 460 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 JAG2Q9Y219 1238 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 FER1L6Q2WGJ9 1857 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 SNED1Q8TER0 1413 aa7.42□□□□□ -1.22
GPNMB-208ENST00000470994 COL4A5P29400 1685 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 TIAM2Q8IVF5 1701 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 SIPA1L3O60292 1781 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 DLEC1Q9Y238 1755 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 ADM5C9JUS6 153 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 SYN1P17600 705 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 RPS12P25398 132 aaKnown RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 ZNF385BQ569K4 471 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 CCDC30Q5VVM6 783 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 ANKRD18AQ8IVF6 992 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 TMEM151BQ8IW70 566 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 C8orf58Q8NAV2 365 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 ADAMTS10Q9H324 1103 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 GBA2Q9HCG7 927 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 IFT57Q9NWB7 429 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 CWC25Q9NXE8 425 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 CNOT6Q9ULM6 557 aaKnown RBP7.41□□□□□ -1.22
GPNMB-208ENST00000470994 CDHR2Q9BYE9 1310 aa7.41□□□□□ -1.22
GPNMB-208ENST00000470994 FITM1A5D6W6 292 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 FOXD2O60548 495 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-208ENST00000470994 PDE8AO60658 829 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 PCCAP05165 728 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-208ENST00000470994 ZNF853P0CG23 659 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 NOGQ13253 232 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 RASIP1Q5U651 963 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 RGMBQ6NW40 437 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 CCDC191Q8NCU4 936 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 MCOLN1Q9GZU1 580 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 PRKRIP1Q9H875 184 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-208ENST00000470994 GPATCH2Q9NW75 528 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 MAP3K2Q9Y2U5 619 aa7.4□□□□□ -1.22
GPNMB-208ENST00000470994 CCDC88AQ3V6T2 1871 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 ASTN2O75129 1339 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-208ENST00000470994 CA12O43570 354 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 VIL1P09327 827 aaKnown RBP7.39□□□□□ -1.23
GPNMB-208ENST00000470994 TPP2P29144 1249 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-208ENST00000470994 GRK4P32298 578 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 KIF23Q02241 960 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-208ENST00000470994 NEXNQ0ZGT2 675 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 DSC3Q14574 896 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 ERICH6BQ5W0A0 696 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 ZNF605Q86T29 641 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 CDH24Q86UP0 819 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 HHIPL1Q96JK4 782 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 STK31Q9BXU1 1019 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 GGA3Q9NZ52 723 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 DUSP13Q9UII6 198 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
GPNMB-208ENST00000470994 BCORQ6W2J9 1755 aa7.38□□□□□ -1.23
GPNMB-208ENST00000470994 RTL9Q8NET4 1388 aa7.38□□□□□ -1.23
GPNMB-208ENST00000470994 PI4KAP2A4QPH2 592 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms