RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 GFRA1P56159 465 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 KIAA2012Q0VF49 1180 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 KLF10Q13118 480 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 PPP2R5DQ14738 602 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 NCAPHQ15003 741 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 CWF19L1Q69YN2 538 aaKnown RBP3.97□□□□□ -1.77
UBXN4-206ENST00000470687 GTF2IRD2BQ6EKJ0 949 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 ZNF662Q6ZS27 426 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 GTF2IRD2Q86UP8 949 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 CKAP2LQ8IYA6 745 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 LINC00482Q8N8I6 264 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 BVESQ8NE79 360 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 ST13P5Q8NFI4 369 aaPredicted RBP3.97□□□□□ -1.77
UBXN4-206ENST00000470687 SMARCC1Q92922 1105 aaPredicted RBP3.97□□□□□ -1.77
UBXN4-206ENST00000470687 DHRS1Q96LJ7 313 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 HIRIP3Q9BW71 556 aaPredicted RBP3.97□□□□□ -1.77
UBXN4-206ENST00000470687 ZSWIM4Q9H7M6 989 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 WHRNQ9P202 907 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 CARMIL1Q5VZK9 1371 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 ABCC10Q5T3U5 1492 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 ZNF536O15090 1300 aa3.96□□□□□ -1.77
UBXN4-206ENST00000470687 MROH6A6NGR9 719 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 SMARCA5O60264 1052 aaPredicted RBP3.96□□□□□ -1.78
UBXN4-206ENST00000470687 THBDP07204 575 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 KCNA6P17658 529 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 RPL13P26373 211 aaKnown RBP3.96□□□□□ -1.78
UBXN4-206ENST00000470687 L1CAMP32004 1257 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 THBS2P35442 1172 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 ICAM4Q14773 271 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 TCEAL1Q15170 157 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 DPY19L1Q2PZI1 675 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 FAM26FQ5R3K3 315 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 HEATR6Q6AI08 1181 aaKnown RBP3.96□□□□□ -1.78
UBXN4-206ENST00000470687 BORAQ6PGQ7 559 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 LRP10Q7Z4F1 713 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 TMEM145Q8NBT3 493 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 DDX11Q96FC9 970 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 SCLYQ96I15 445 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 ZDHHC15Q96MV8 337 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 PTCHD1Q96NR3 888 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 CDK5RAP1Q96SZ6 601 aaKnown RBP3.96□□□□□ -1.78
UBXN4-206ENST00000470687 SPATA9Q9BWV2 254 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 KLC2Q9H0B6 622 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 NKX2-4Q9H2Z4 354 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 CD248Q9HCU0 757 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 SLC12A7Q9Y666 1083 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 TNIKQ9UKE5 1360 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 CUL7Q14999 1698 aa3.96□□□□□ -1.78
UBXN4-206ENST00000470687 PLB1Q6P1J6 1458 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 ESYT3A0FGR9 886 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 STXBP3O00186 592 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 PPP1R12AO14974 1030 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-206ENST00000470687 KCNH1O95259 989 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 AMHP03971 560 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 TESK1Q15569 626 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 FAM124AQ86V42 546 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 NLRP10Q86W26 655 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 ZBTB38Q8NAP3 1195 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-206ENST00000470687 SH3TC2Q8TF17 1288 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 PEX11GQ96HA9 241 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 GORASP1Q9BQQ3 440 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 FAM126AQ9BYI3 521 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-206ENST00000470687 PPP4R1LQ9P1A2 415 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 PPARGC1AQ9UBK2 798 aaKnown RBP3.95□□□□□ -1.78
UBXN4-206ENST00000470687 ING1Q9UK53 422 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-206ENST00000470687 NPFFR2Q9Y5X5 522 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 PTCH2Q9Y6C5 1203 aa3.95□□□□□ -1.78
UBXN4-206ENST00000470687 UHRF1BP1LA0JNW5 1464 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 PHLDB1Q86UU1 1377 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 TBC1D8O95759 1140 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 C8BP07358 591 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 CYP2C8P10632 490 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 POU3F3P20264 500 aaPredicted RBP3.94□□□□□ -1.78
UBXN4-206ENST00000470687 TGM1P22735 817 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 ZNF143P52747 638 aaPredicted RBP3.94□□□□□ -1.78
UBXN4-206ENST00000470687 SCRN1Q12765 414 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 SLC9A5Q14940 896 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 ABHD17CQ6PCB6 329 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 KCNT2Q6UVM3 1135 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 CABP7Q86V35 215 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 NETO2Q8NC67 525 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 SLC7A14Q8TBB6 771 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 SRPK1Q96SB4 655 aaKnown RBP3.94□□□□□ -1.78
UBXN4-206ENST00000470687 APBA2Q99767 749 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 C11orf84Q9BUA3 381 aaPredicted RBP3.94□□□□□ -1.78
UBXN4-206ENST00000470687 TMEM260Q9NX78 707 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 NUDT5Q9UKK9 219 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 AKT3Q9Y243 479 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 DIS3Q9Y2L1 958 aaKnown RBP3.94□□□□□ -1.78
UBXN4-206ENST00000470687 HS3ST3A1Q9Y663 406 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 KDM2BQ8NHM5 1336 aa3.94□□□□□ -1.78
UBXN4-206ENST00000470687 LAMTOR5O43504 91 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 ITGA4P13612 1032 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 SDSP20132 328 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 NOP2P46087 812 aaKnown RBP3.93□□□□□ -1.78
UBXN4-206ENST00000470687 GRB10Q13322 594 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 SV2CQ496J9 727 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 C2orf27AQ580R0 203 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 MCTP2Q6DN12 878 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 FSTL4Q6MZW2 842 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms