RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 ST3GAL1Q11201 340 aa15.45■□□□□ 0.06
HDAC7-219ENST00000470668 DDX42Q86XP3 938 aaKnown RBP eCLIP15.45■□□□□ 0.06
HDAC7-219ENST00000470668 ECT2Q9H8V3 914 aa15.45■□□□□ 0.06
HDAC7-219ENST00000470668 COL4A3BPQ9Y5P4 624 aa15.45■□□□□ 0.06
HDAC7-219ENST00000470668 CDHR2Q9BYE9 1310 aa15.45■□□□□ 0.06
HDAC7-219ENST00000470668 TRIM37O94972 964 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 PSMD2Q13200 908 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
HDAC7-219ENST00000470668 C6orf118Q5T5N4 469 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 ZNF579Q8NAF0 562 aaKnown RBP15.44■□□□□ 0.06
HDAC7-219ENST00000470668 DONSONQ9NYP3 566 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 HARSP12081 509 aaKnown RBP15.44■□□□□ 0.06
HDAC7-219ENST00000470668 ATF7P17544 494 aaPredicted RBP15.44■□□□□ 0.06
HDAC7-219ENST00000470668 CA4P22748 312 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 SLC1A4P43007 532 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 SP4Q02446 784 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 CYP4A11Q02928 519 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 PPP4R3AQ6IN85 833 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 SLC30A9Q6PML9 568 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 EHMT1Q9H9B1 1298 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 ZNF211Q13398 564 aaPredicted RBP15.44■□□□□ 0.06
HDAC7-219ENST00000470668 EZH2Q15910 746 aaKnown RBP15.44■□□□□ 0.06
HDAC7-219ENST00000470668 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 TMOD2Q9NZR1 351 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 ZNF148Q9UQR1 794 aa15.44■□□□□ 0.06
HDAC7-219ENST00000470668 FAM98CQ17RN3 349 aaKnown RBP15.43■□□□□ 0.06
HDAC7-219ENST00000470668 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 SRRM1Q8IYB3 904 aaKnown RBP15.43■□□□□ 0.06
HDAC7-219ENST00000470668 LCORLQ8N3X6 602 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 GPR108Q9NPR9 543 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 KIAA1024Q9UPX6 916 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 PDE8BO95263 885 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 FAM107AO95990 144 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 FAM182BQ5T319 152 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 KAZNQ674X7 775 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
HDAC7-219ENST00000470668 FBXO2Q9UK22 296 aaPredicted RBP15.43■□□□□ 0.06
HDAC7-219ENST00000470668 ABCC12Q96J65 1359 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 CCDC188H7C350 402 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 MYBL1P10243 752 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 PTGISQ16647 500 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 DCUN1D2Q6PH85 259 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 PPM1KQ8N3J5 372 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 HIPK4Q8NE63 616 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 MYCBPAPQ8TBZ2 947 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 CLIC2O15247 247 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 PAX7P23759 505 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 TPTE2Q6XPS3 522 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 P3H4Q92791 437 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 NT5C3AQ9H0P0 336 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 KIF9Q9HAQ2 790 aa15.43■□□□□ 0.06
HDAC7-219ENST00000470668 MAP3K7O43318 606 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 PPFIA2O75334 1257 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 TPD52P55327 224 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-219ENST00000470668 ADCY2Q08462 1091 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 SEPT2Q15019 361 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 NUDCD1Q96RS6 583 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 CAPN11Q9UMQ6 739 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-219ENST00000470668 PDHBP11177 359 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 ERVK-24P63145 666 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 PIH1D3Q9NQM4 214 aaKnown RBP15.42■□□□□ 0.06
HDAC7-219ENST00000470668 BZW2Q9Y6E2 419 aaKnown RBP15.42■□□□□ 0.06
HDAC7-219ENST00000470668 PLEKHG2Q9H7P9 1386 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 NEDD4P46934 1319 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 CTSWP56202 376 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 WDR93Q6P2C0 686 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 RFX8Q6ZV50 586 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 MDM1Q8TC05 714 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 MORC4Q8TE76 937 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
HDAC7-219ENST00000470668 DDX39AO00148 427 aaKnown RBP15.41■□□□□ 0.06
HDAC7-219ENST00000470668 TRPA1O75762 1119 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 HIBADHP31937 336 aaKnown RBP15.41■□□□□ 0.06
HDAC7-219ENST00000470668 STRN3Q13033 797 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 PABPC4Q13310 644 aaKnown RBP eCLIP15.41■□□□□ 0.061e-24■□□□□ 9
HDAC7-219ENST00000470668 SGO2Q562F6 1265 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 TGFBRAP1Q8WUH2 860 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 NUF2Q9BZD4 464 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 NOD2Q9HC29 1040 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 SART1O43290 800 aaKnown RBP15.41■□□□□ 0.06
HDAC7-219ENST00000470668 RIC8AQ9NPQ8 531 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
HDAC7-219ENST00000470668 TYW1Q9NV66 732 aaKnown RBP15.41■□□□□ 0.06
HDAC7-219ENST00000470668 ARHGEF35A5YM69 484 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 ECEL1O95672 775 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 ESRRAP11474 423 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-219ENST00000470668 DRP2Q13474 957 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 HPS3Q969F9 1004 aa15.41■□□□□ 0.06
HDAC7-219ENST00000470668 A0A0G2JND7 137 aa15.4■□□□□ 0.06
HDAC7-219ENST00000470668 CREB3O43889 395 aa15.4■□□□□ 0.06
HDAC7-219ENST00000470668 ARL1P40616 181 aaPredicted RBP15.4■□□□□ 0.06
HDAC7-219ENST00000470668 DYNLL1P63167 89 aaKnown RBP15.4■□□□□ 0.06
HDAC7-219ENST00000470668 CCDC89Q8N998 374 aa15.4■□□□□ 0.06
HDAC7-219ENST00000470668 CCDC127Q96BQ5 260 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms