RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 PPP1R12BO60237 982 aaPredicted RBP18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 SSBP05455 408 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 COASYQ13057 564 aa18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 CATSPER3Q86XQ3 398 aa18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 ZNF280CQ8ND82 737 aa18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 ZKSCAN4Q969J2 545 aaPredicted RBP18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 UIMC1Q96RL1 719 aa18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 RABGAP1Q9Y3P9 1069 aa18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 SSC5DA1L4H1 1573 aa18.84■□□□□ 0.61
SMARCD3-206ENST00000470588 ICAM1P05362 532 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 PTPRAP18433 802 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 FXR1P51114 621 aaKnown RBP eCLIP18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 SLC12A3P55017 1021 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 ETF1P62495 437 aaKnown RBP18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 MTMR2Q13614 643 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 KRT26Q7Z3Y9 468 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 GPBP1Q86WP2 473 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 TMTC1Q8IUR5 882 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 CNOT6LQ96LI5 555 aaKnown RBP18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 TSG101Q99816 390 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 TANGO6Q9C0B7 1094 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 VAV3Q9UKW4 847 aa18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 CTDP1Q9Y5B0 961 aaPredicted RBP18.83■□□□□ 0.61
SMARCD3-206ENST00000470588 CTIFO43310 598 aaKnown RBP18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 SPATA31C1P0DKV0 1188 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 CYP11B2P19099 503 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 MTIF2P46199 727 aaKnown RBP18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 SPP2Q13103 211 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 FAM26FQ5R3K3 315 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 MYOCDQ8IZQ8 938 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 SAMD3Q8N6K7 520 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 SYT2Q8N9I0 419 aaPredicted RBP18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 NUP58Q9BVL2 599 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 PNMA2Q9UL42 364 aa18.83■□□□□ 0.6
SMARCD3-206ENST00000470588 C19orf81C9J6K1 198 aa18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 ADM5C9JUS6 153 aa18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 KIF20AO95235 890 aa18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 PRKCSHP14314 528 aaPredicted RBP18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 BACE1P56817 501 aa18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 RETREG2Q8NC44 543 aa18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 CYP2W1Q8TAV3 490 aa18.82■□□□□ 0.6
SMARCD3-206ENST00000470588 IREB2P48200 963 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 HSD17B4P51659 736 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 TBC1D8BQ0IIM8 1120 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 PRKG1Q13976 671 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 SLC5A5Q92911 643 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 CCPG1Q9ULG6 757 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 CSADQ9Y600 493 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 ZHX2Q9Y6X8 837 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 PHIPQ8WWQ0 1821 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 FRMD3A2A2Y4 597 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 POTEFA5A3E0 1075 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 SMCHD1A6NHR9 2005 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 PES1O00541 588 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 KRT18P05783 430 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 POTEIP0CG38 1075 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 FDX1P10109 184 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 MUTP22033 750 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 KRT9P35527 623 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 SYCP1Q15431 976 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 CEP55Q53EZ4 464 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 ARSHQ5FYA8 562 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 TRIM65Q6PJ69 517 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 POTEGQ6S5H5 508 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 POTEEQ6S8J3 1075 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 SYT10Q6XYQ8 523 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 TOGARAM2Q6ZUX3 1019 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 OTOP1Q7RTM1 612 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 PNMA8AQ86V59 439 aaPredicted RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 EIF2AK1Q9BQI3 630 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 NOC4LQ9BVI4 516 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 TUFT1Q9NNX1 390 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 ABHD10Q9NUJ1 306 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 TMOD4Q9NZQ9 345 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 CAPN11Q9UMQ6 739 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 PCDHA2Q9Y5H9 948 aa18.81■□□□□ 0.6
SMARCD3-206ENST00000470588 ZNF536O15090 1300 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 PHLPP2Q6ZVD8 1323 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 B4DLN1 442 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 MEIS1O00470 390 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 USP2O75604 605 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 PSMD10O75832 226 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 CCDC175P0C221 793 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 VCAM1P19320 739 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 GHRHRQ02643 423 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 PPP2R5CQ13362 524 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 FKBP15Q5T1M5 1219 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 CYP26C1Q6V0L0 522 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 OR8K1Q8NGG5 319 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 IQCDQ96DY2 449 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 AGBL1Q96MI9 1066 aa18.8■□□□□ 0.6
SMARCD3-206ENST00000470588 SOWAHDA6NJG2 315 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 FLOT1O75955 427 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms